RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 FAM110BQ8TC76 370 aa8.91□□□□□ -0.98
NPLOC4-220ENST00000576940 OTUB1Q96FW1 271 aaPredicted RBP8.91□□□□□ -0.98
NPLOC4-220ENST00000576940 C16orf58Q96GQ5 468 aa8.91□□□□□ -0.98
NPLOC4-220ENST00000576940 MRPL57Q9BQC6 102 aaKnown RBP8.91□□□□□ -0.98
NPLOC4-220ENST00000576940 PSD2Q9BQI7 771 aa8.91□□□□□ -0.98
NPLOC4-220ENST00000576940 BCO1Q9HAY6 547 aa8.91□□□□□ -0.98
NPLOC4-220ENST00000576940 GP6Q9HCN6 339 aa8.91□□□□□ -0.98
NPLOC4-220ENST00000576940 MIEF1Q9NQG6 463 aa8.91□□□□□ -0.98
NPLOC4-220ENST00000576940 TAS2R7Q9NYW3 318 aa8.91□□□□□ -0.98
NPLOC4-220ENST00000576940 NFU1Q9UMS0 254 aa8.91□□□□□ -0.98
NPLOC4-220ENST00000576940 POLR3HQ9Y535 204 aaPredicted RBP8.91□□□□□ -0.98
NPLOC4-220ENST00000576940 HEATR1Q9H583 2144 aaKnown RBP8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 IGHV4-61A0A0C4DH41 118 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 OR5H1A6NKK0 313 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 VWC2LB2RUY7 222 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 H7C417 338 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 SCDO00767 359 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 RAD51DO75771 328 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 SLITRK5O94991 958 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 ACP2P11117 423 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 HPGDP15428 266 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 PTAFRP25105 342 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 CD40P25942 277 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 NTSP30990 170 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 EIF1P41567 113 aaKnown RBP8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 C2orf54Q08AI8 447 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 ZNF763Q0D2J5 394 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 RASGEF1BQ0VAM2 473 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 HSPB3Q12988 150 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 ZNF678Q5SXM1 525 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 CCNJQ5T5M9 372 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 ANKRD26P1Q6NSI1 321 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 TMEM108Q6UXF1 575 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 C12orf54Q6X4T0 127 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 GPRIN3Q6ZVF9 776 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 SLC43A2Q8N370 569 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 ZNF433Q8N7K0 673 aaPredicted RBP8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 SLC16A11Q8NCK7 471 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 NUP43Q8NFH3 380 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 ZNF75CPQ92670 426 aaPredicted RBP8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 HOXB13Q92826 284 aaPredicted RBP8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 GIMAP5Q96F15 307 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 EGLN2Q96KS0 407 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 FOXN4Q96NZ1 517 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 INPP5KQ9BT40 448 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 SOX7Q9BT81 388 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 MRPL46Q9H2W6 279 aaKnown RBP8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 C12orf65Q9H3J6 166 aaKnown RBP8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 UBQLN4Q9NRR5 601 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 SIRT5Q9NXA8 310 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 MGAT4BQ9UQ53 548 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 ATP23Q9Y6H3 246 aa8.9□□□□□ -0.98
NPLOC4-220ENST00000576940 DYSFO75923 2080 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 ESYT3A0FGR9 886 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 TTC36A6NLP5 189 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 GJE1A6NN92 205 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 M0R1B8 84 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 RGS14O43566 566 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 TCF21O43680 179 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 NUDT14O95848 222 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 NGFRP08138 427 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 DHRS4L1P0CG22 281 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 APEHP13798 732 aaKnown RBP8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 ITGA2P17301 1181 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 COX5AP20674 150 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 GPC1P35052 558 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 NR4A2P43354 598 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 FOXG1P55316 489 aaPredicted RBP8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 FOXA1P55317 472 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 RAC3P60763 192 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 CAV1Q03135 178 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 ZNF117Q03924 483 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 CARTPTQ16568 116 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 DUSP5Q16690 384 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 TSNAXIP1Q2TAA8 658 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 CR1LQ2VPA4 569 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 ARL13AQ5H913 290 aaPredicted RBP8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 LRIG3Q6UXM1 1119 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 P2RY8Q86VZ1 359 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 MISPQ8IVT2 679 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 ZNF100Q8IYN0 542 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 DEPDC4Q8N2C3 294 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 C17orf53Q8N3J3 647 aaPredicted RBP8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 CDRT4Q8N9R6 151 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 SPATA4Q8NEY3 305 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 PHOSPHO1Q8TCT1 267 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 ZFP90Q8TF47 636 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 CIDECQ96AQ7 238 aaPredicted RBP8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 C16orf45Q96MC5 204 aaPredicted RBP8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 ZNF382Q96SR6 550 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 NAPGQ99747 312 aaPredicted RBP8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 SHCBP1LQ9BZQ2 653 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 ANKZF1Q9H8Y5 726 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 KLHL9Q9P2J3 617 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 CARD8Q9Y2G2 431 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 UTP11Q9Y3A2 253 aaKnown RBP8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 SLC25A15Q9Y619 301 aa8.89□□□□□ -0.99
NPLOC4-220ENST00000576940 PMF1-BGLAPU3KQ54 211 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms