RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 PRPF19Q9UMS4 504 aaKnown RBP7.79□□□□□ -1.16
NUP88-211ENST00000575976 NPIPA1Q9UND3 350 aa7.79□□□□□ -1.16
NUP88-211ENST00000575976 SLC35A3Q9Y2D2 325 aa7.79□□□□□ -1.16
NUP88-211ENST00000575976 NINQ8N4C6 2090 aa7.79□□□□□ -1.16
NUP88-211ENST00000575976 CNTRLQ7Z7A1 2325 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 CDHR4A6H8M9 788 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 ANKUB1A6NFN9 424 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 GSC2O15499 205 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 CDC40O60508 579 aaKnown RBP eCLIP7.78□□□□□ -1.16
NUP88-211ENST00000575976 ADAM11O75078 769 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 PDE5AO76074 875 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 HPNP05981 417 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 GKN3PP0CG01 181 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 GGT1P19440 569 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 CD247P20963 164 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 TCEA1P23193 301 aaKnown RBP7.78□□□□□ -1.16
NUP88-211ENST00000575976 DPP4P27487 766 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 SRD5A2P31213 254 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 PRKAR1BP31321 381 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 KCNJ5P48544 419 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 TDGF1P3P51864 188 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 DSCR4P56555 118 aaPredicted RBP7.78□□□□□ -1.16
NUP88-211ENST00000575976 SKP2Q13309 424 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 TOMM34Q15785 309 aaPredicted RBP7.78□□□□□ -1.16
NUP88-211ENST00000575976 DUSP7Q16829 419 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 LRRC23Q53EV4 343 aaPredicted RBP7.78□□□□□ -1.16
NUP88-211ENST00000575976 EIPR1Q53HC9 387 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 CMPK2Q5EBM0 449 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 WIPI1Q5MNZ9 446 aaPredicted RBP7.78□□□□□ -1.16
NUP88-211ENST00000575976 RNF220Q5VTB9 566 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 ARSKQ6UWY0 536 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 CCDC121Q6ZUS5 278 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 YRDCQ86U90 279 aaKnown RBP7.78□□□□□ -1.16
NUP88-211ENST00000575976 COMTD1Q86VU5 262 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 ARMC8Q8IUR7 673 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 ARHGAP24Q8N264 748 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 TMCO5AQ8N6Q1 288 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 TNIP2Q8NFZ5 429 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 GPR32P1Q8NGA4 272 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 OR5W2Q8NH69 310 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 CPT1CQ8TCG5 803 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 NR4A3Q92570 626 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 ZNF524Q96C55 264 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 C1GALT1C1Q96EU7 318 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 CLPTM1LQ96KA5 538 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 GPR137Q96N19 417 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 BARD1Q99728 777 aaKnown RBP7.78□□□□□ -1.16
NUP88-211ENST00000575976 PINK1Q9BXM7 581 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 PCDHAC1Q9H158 963 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 PTGES2Q9H7Z7 377 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 ZDHHC11Q9H8X9 412 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 HHATLQ9HCP6 504 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 ACKR4Q9NPB9 350 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 EXOSC3Q9NQT5 275 aaKnown RBP7.78□□□□□ -1.16
NUP88-211ENST00000575976 AGPAT4Q9NRZ5 378 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 OLAHQ9NV23 265 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 QPCTLQ9NXS2 382 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 LIPGQ9Y5X9 500 aa7.78□□□□□ -1.16
NUP88-211ENST00000575976 TRGV5A0A0B4J1U4 118 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 TMEM229AB2RXF0 380 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 SHISA8B8ZZ34 492 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 AP3D1O14617 1153 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 ZNHIT1O43257 154 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 FRS3O43559 492 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 ZIC3O60481 467 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 DNAJC8O75937 253 aaPredicted RBP7.77□□□□□ -1.17
NUP88-211ENST00000575976 NUDT14O95848 222 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 IFNA14P01570 189 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 IGHG3P01860 377 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 PRG2P13727 222 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 HK1P19367 917 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 ME2P23368 584 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 RYKP34925 604 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 ACAA2P42765 397 aaKnown RBP7.77□□□□□ -1.17
NUP88-211ENST00000575976 RASSF2P50749 326 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 CCR4P51679 360 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 SUMO3P55854 103 aaPredicted RBP7.77□□□□□ -1.17
NUP88-211ENST00000575976 NCALDP61601 193 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 FOXK1P85037 733 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 HSF1Q00613 529 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 GABPB1Q06547 395 aaPredicted RBP7.77□□□□□ -1.17
NUP88-211ENST00000575976 CBFBQ13951 182 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 FXNQ16595 210 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 ZSWIM7Q19AV6 140 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 SPATS1Q496A3 300 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 CYBRD1Q53TN4 286 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 TRILQ7L0X0 811 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 GRAMD2AQ8IUY3 354 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 FAM83FQ8NEG4 500 aaPredicted RBP7.77□□□□□ -1.17
NUP88-211ENST00000575976 BHLHE22Q8NFJ8 381 aaPredicted RBP7.77□□□□□ -1.17
NUP88-211ENST00000575976 TOR1AIP2Q8NFQ8 470 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 OR5M1Q8NGP8 315 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 OR10Q1Q8NGQ4 319 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 OR14L1PQ8NHC6 308 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 GPR119Q8TDV5 335 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 FAM162AQ96A26 154 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 NPAS1Q99742 590 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 SLX1AQ9BQ83 275 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 WFDC6Q9BQY6 131 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 CADM1Q9BY67 442 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms