RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 MANBAO00462 879 aa14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 STX16O14662 325 aa14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 RGS14O43566 566 aa14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 SMIM24O75264 130 aa14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 RGS9O75916 674 aaPredicted RBP14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 SLITRK5O94991 958 aa14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 OR4F21O95013 312 aa14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 NUDT14O95848 222 aa14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 GSTA2P09210 222 aa14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 TYK2P29597 1187 aa14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 BTKQ06187 659 aa14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 ACSM2AQ08AH3 577 aa14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 MLC1Q15049 377 aa14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 ACSM2BQ68CK6 577 aa14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 RINLQ6ZS11 566 aa14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 GALNT5Q7Z7M9 940 aa14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 ZAR1Q86SH2 424 aa14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 PLD6Q8N2A8 252 aaKnown RBP14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 ZNF540Q8NDQ6 660 aa14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 ZFP90Q8TF47 636 aa14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 APIPQ96GX9 242 aa14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 COQ10BQ9H8M1 238 aa14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 FKRPQ9H9S5 495 aa14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 NFU1Q9UMS0 254 aa14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 TRAF6Q9Y4K3 522 aa14.28□□□□□ -0.12
CTDNEP1-211ENST00000575783 A0A0A6YYJ9 748 aa14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 A0A1W2PNR3 127 aa14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 SLCO1B7G3V0H7 640 aa14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 SCDO00767 359 aa14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 EIF3HO15372 352 aaKnown RBP eCLIP14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 NGFRP08138 427 aa14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 ANXA4P09525 319 aaPredicted RBP14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 DDCP20711 480 aa14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 ELK4P28324 431 aa14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 SLC7A1P30825 629 aa14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 IL2RGP31785 369 aa14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 PHC1P78364 1004 aa14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 DEFA6Q01524 100 aa14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 CD226Q15762 336 aa14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 SWI5Q1ZZU3 235 aa14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 MST1LQ2TV78 715 aa14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 GAS2L3Q86XJ1 694 aa14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 LRRC8AQ8IWT6 810 aa14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 LINC01356Q8N9X3 169 aa14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 SEMA6DQ8NFY4 1073 aa14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 FBXO30Q8TB52 745 aa14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 ZNF75CPQ92670 426 aaPredicted RBP14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 DPH5Q9H2P9 285 aa14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 METTL17Q9H7H0 456 aaPredicted RBP14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 MIEF1Q9NQG6 463 aa14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 ZNF225Q9UK10 706 aa14.27□□□□□ -0.13
CTDNEP1-211ENST00000575783 HMX2A2RU54 273 aa14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 KRT6AP02538 564 aa14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 KRT6BP04259 564 aa14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 RBP1P09455 135 aa14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 HSD3B1P14060 373 aa14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 HSD3B2P26439 372 aa14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 APEX1P27695 318 aaKnown RBP14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 NTSP30990 170 aa14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 TIA1P31483 386 aaKnown RBP eCLIP14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 STX2P32856 288 aa14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 KRT6CP48668 564 aa14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 RNF144AP50876 292 aaPredicted RBP14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 PRKAG1P54619 331 aa14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 RAC3P60763 192 aa14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 CALCOCO2Q13137 446 aa14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 TRADDQ15628 312 aa14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 UAP1Q16222 522 aaPredicted RBP14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 SPIN4Q56A73 249 aa14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 FBXW9Q5XUX1 488 aa14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 MISPQ8IVT2 679 aa14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 ZNF483Q8TF39 744 aaPredicted RBP14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 AMDHD1Q96NU7 426 aa14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 ACPTQ9BZG2 426 aa14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 SHCBP1LQ9BZQ2 653 aa14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 ANKZF1Q9H8Y5 726 aa14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 MYOZ1Q9NP98 299 aaPredicted RBP14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 UBQLN4Q9NRR5 601 aa14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 GRID1Q9ULK0 1009 aa14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 TMCO1Q9UM00 188 aa14.26□□□□□ -0.13
CTDNEP1-211ENST00000575783 TMEM89A2RUT3 159 aa14.25□□□□□ -0.13
CTDNEP1-211ENST00000575783 TTC36A6NLP5 189 aa14.25□□□□□ -0.13
CTDNEP1-211ENST00000575783 ZNF724A8MTY0 619 aa14.25□□□□□ -0.13
CTDNEP1-211ENST00000575783 ATP6V1G2-DDX39BF2Z307 99 aa14.25□□□□□ -0.13
CTDNEP1-211ENST00000575783 CYTIPO60759 359 aa14.25□□□□□ -0.13
CTDNEP1-211ENST00000575783 ULK1O75385 1050 aa14.25□□□□□ -0.13
CTDNEP1-211ENST00000575783 RPS17P08708 135 aaKnown RBP14.25□□□□□ -0.13
CTDNEP1-211ENST00000575783 PRPS2P11908 318 aa14.25□□□□□ -0.13
CTDNEP1-211ENST00000575783 SNRPD2P62316 118 aaKnown RBP14.25□□□□□ -0.13
CTDNEP1-211ENST00000575783 ZNF117Q03924 483 aa14.25□□□□□ -0.13
CTDNEP1-211ENST00000575783 TOMM34Q15785 309 aaPredicted RBP14.25□□□□□ -0.13
CTDNEP1-211ENST00000575783 VPS26BQ4G0F5 336 aa14.25□□□□□ -0.13
CTDNEP1-211ENST00000575783 SLC46A3Q7Z3Q1 461 aa14.25□□□□□ -0.13
CTDNEP1-211ENST00000575783 PHOSPHO1Q8TCT1 267 aa14.25□□□□□ -0.13
CTDNEP1-211ENST00000575783 TRRAPQ9Y4A5 3859 aa14.25□□□□□ -0.13
CTDNEP1-211ENST00000575783 FAM157AC9JC47 383 aa14.24□□□□□ -0.13
CTDNEP1-211ENST00000575783 KCNK2O95069 426 aa14.24□□□□□ -0.13
CTDNEP1-211ENST00000575783 NKX2-2O95096 273 aa14.24□□□□□ -0.13
CTDNEP1-211ENST00000575783 SERPINB8P50452 374 aa14.24□□□□□ -0.13
CTDNEP1-211ENST00000575783 CHN2P52757 468 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms