RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ISLR2Q6UXK2 745 aa21.96■■□□□ 1.11
ATPAF1-213ENST00000574428 PLEKHM3Q6ZWE6 761 aa21.96■■□□□ 1.11
ATPAF1-213ENST00000574428 ZNF227Q86WZ6 799 aa21.96■■□□□ 1.11
ATPAF1-213ENST00000574428 GPALPP1Q8IXQ4 340 aa21.96■■□□□ 1.11
ATPAF1-213ENST00000574428 FDCSPQ8NFU4 85 aa21.96■■□□□ 1.11
ATPAF1-213ENST00000574428 SECISBP2Q96T21 854 aaKnown RBP21.96■■□□□ 1.11
ATPAF1-213ENST00000574428 UTP23Q9BRU9 249 aaKnown RBP21.96■■□□□ 1.11
ATPAF1-213ENST00000574428 LAT2Q9GZY6 243 aa21.96■■□□□ 1.11
ATPAF1-213ENST00000574428 NMNAT1Q9HAN9 279 aaPredicted RBP21.96■■□□□ 1.11
ATPAF1-213ENST00000574428 EXOSC3Q9NQT5 275 aaKnown RBP21.96■■□□□ 1.11
ATPAF1-213ENST00000574428 ACAD8Q9UKU7 415 aa21.96■■□□□ 1.11
ATPAF1-213ENST00000574428 LRCH1Q9Y2L9 728 aa21.96■■□□□ 1.11
ATPAF1-213ENST00000574428 SAMHD1Q9Y3Z3 626 aaKnown RBP21.96■■□□□ 1.11
ATPAF1-213ENST00000574428 HRH3Q9Y5N1 445 aa21.96■■□□□ 1.11
ATPAF1-213ENST00000574428 G3V3Y1 287 aa21.95■■□□□ 1.1
ATPAF1-213ENST00000574428 ADAMDEC1O15204 470 aa21.95■■□□□ 1.1
ATPAF1-213ENST00000574428 E2F6O75461 281 aa21.95■■□□□ 1.1
ATPAF1-213ENST00000574428 ENDOUP21128 410 aaKnown RBP21.95■■□□□ 1.1
ATPAF1-213ENST00000574428 CASRP41180 1078 aa21.95■■□□□ 1.1
ATPAF1-213ENST00000574428 EPS8Q12929 822 aa21.95■■□□□ 1.1
ATPAF1-213ENST00000574428 TMEM179BQ7Z7N9 219 aa21.95■■□□□ 1.1
ATPAF1-213ENST00000574428 LSRQ86X29 649 aaPredicted RBP21.95■■□□□ 1.1
ATPAF1-213ENST00000574428 ZNF440Q8IYI8 595 aa21.95■■□□□ 1.1
ATPAF1-213ENST00000574428 CATSPER1Q8NEC5 780 aa21.95■■□□□ 1.1
ATPAF1-213ENST00000574428 ADAMTS16Q8TE57 1224 aa21.95■■□□□ 1.1
ATPAF1-213ENST00000574428 ZNF552Q9H707 407 aaPredicted RBP21.95■■□□□ 1.1
ATPAF1-213ENST00000574428 LRFN1Q9P244 771 aa21.95■■□□□ 1.1
ATPAF1-213ENST00000574428 OAZ3Q9UMX2 235 aa21.95■■□□□ 1.1
ATPAF1-213ENST00000574428 WIF1Q9Y5W5 379 aa21.95■■□□□ 1.1
ATPAF1-213ENST00000574428 MED19A0JLT2 244 aaPredicted RBP21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 C1QTNF9BB2RNN3 333 aa21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 EIF4E2O60573 245 aaKnown RBP21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 C1QTNF9P0C862 333 aa21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 LAPTM4AQ15012 233 aa21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 EPHX4Q8IUS5 362 aa21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 MISPQ8IVT2 679 aa21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 CIB1Q99828 191 aa21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 ZNF559Q9BR84 538 aa21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 FNDC11Q9BVV2 318 aa21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 CPNE5Q9HCH3 593 aa21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 ACER3Q9NUN7 267 aa21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 ICAM5Q9UMF0 924 aa21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 LYVE1Q9Y5Y7 322 aa21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 B4DXG7 233 aa21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 DPM1O60762 260 aa21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 FMO6PO60774 539 aa21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 ZNF23P17027 643 aa21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 C17orf67Q0P5P2 114 aa21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 SNTA1Q13424 505 aa21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 OR1Q1Q15612 314 aa21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 COL28A1Q2UY09 1125 aa21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 SPINK14Q6IE38 97 aa21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 APLFQ8IW19 511 aaPredicted RBP21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 CNIH4Q9P003 139 aa21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 PPP4R1LQ9P1A2 415 aa21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 MAGED1Q9Y5V3 778 aaPredicted RBP21.94■■□□□ 1.1
ATPAF1-213ENST00000574428 DMXL2Q8TDJ6 3036 aa21.93■■□□□ 1.1
ATPAF1-213ENST00000574428 TNFRSF11BO00300 401 aa21.93■■□□□ 1.1
ATPAF1-213ENST00000574428 GADD45GO95257 159 aa21.93■■□□□ 1.1
ATPAF1-213ENST00000574428 THY1P04216 161 aa21.93■■□□□ 1.1
ATPAF1-213ENST00000574428 H1F0P07305 194 aaKnown RBP21.93■■□□□ 1.1
ATPAF1-213ENST00000574428 LINGO3P0C6S8 592 aa21.93■■□□□ 1.1
ATPAF1-213ENST00000574428 ITPKBP27987 946 aa21.93■■□□□ 1.1
ATPAF1-213ENST00000574428 MFAP5Q13361 173 aa21.93■■□□□ 1.1
ATPAF1-213ENST00000574428 INPP5JQ15735 1006 aaPredicted RBP21.93■■□□□ 1.1
ATPAF1-213ENST00000574428 BROXQ5VW32 411 aa21.93■■□□□ 1.1
ATPAF1-213ENST00000574428 TMEM81Q6P7N7 255 aa21.93■■□□□ 1.1
ATPAF1-213ENST00000574428 OFCC1Q8IZS5 231 aa21.93■■□□□ 1.1
ATPAF1-213ENST00000574428 HS3ST5Q8IZT8 346 aa21.93■■□□□ 1.1
ATPAF1-213ENST00000574428 CADM2Q8N3J6 435 aa21.93■■□□□ 1.1
ATPAF1-213ENST00000574428 PSD4Q8NDX1 1056 aa21.93■■□□□ 1.1
ATPAF1-213ENST00000574428 PIK3C3Q8NEB9 887 aa21.93■■□□□ 1.1
ATPAF1-213ENST00000574428 B4GALNT2Q8NHY0 566 aa21.93■■□□□ 1.1
ATPAF1-213ENST00000574428 EME1Q96AY2 570 aa21.93■■□□□ 1.1
ATPAF1-213ENST00000574428 SIGLEC12Q96PQ1 595 aa21.93■■□□□ 1.1
ATPAF1-213ENST00000574428 BARD1Q99728 777 aaKnown RBP21.93■■□□□ 1.1
ATPAF1-213ENST00000574428 ANGPTL4Q9BY76 406 aa21.93■■□□□ 1.1
ATPAF1-213ENST00000574428 PROK2Q9HC23 129 aa21.93■■□□□ 1.1
ATPAF1-213ENST00000574428 ACACAQ13085 2346 aa21.93■■□□□ 1.1
ATPAF1-213ENST00000574428 PDLIM1O00151 329 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 NEURL1O76050 574 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 EXOC3L2Q2M3D2 409 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 FGD3Q5JSP0 725 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 COLEC12Q5KU26 742 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 SLC30A6Q6NXT4 461 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 ZNF524Q96C55 264 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 SLC41A3Q96GZ6 507 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 DHRS1Q96LJ7 313 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 EPYCQ99645 322 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 SDHAF3Q9NRP4 125 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 MAN2C1Q9NTJ4 1040 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 MED11Q9P086 117 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 A0A0G2JMM0 328 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 TRBV4-1A0A0J9YWV2 114 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 A0A1W2PPB8 328 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 A0A1W2PRS3 328 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 KIR3DP1A8MWS1 328 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 OR5F1O95221 314 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 NUDT14O95848 222 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 P04436 131 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms