RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ZNF655Q8N720 491 aaPredicted RBP14.52□□□□□ -0.09
NUP88-207ENST00000573584 SARGQ9BW04 601 aa14.52□□□□□ -0.09
NUP88-207ENST00000573584 RANBP3Q9H6Z4 567 aaPredicted RBP14.52□□□□□ -0.09
NUP88-207ENST00000573584 INPP5EQ9NRR6 644 aa14.52□□□□□ -0.09
NUP88-207ENST00000573584 B3GNT2Q9NY97 397 aa14.52□□□□□ -0.09
NUP88-207ENST00000573584 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.52□□□□□ -0.09
NUP88-207ENST00000573584 TCRBP04435 133 aa14.52□□□□□ -0.09
NUP88-207ENST00000573584 HTR2AP28223 471 aa14.52□□□□□ -0.09
NUP88-207ENST00000573584 CMPK1P30085 196 aa14.52□□□□□ -0.09
NUP88-207ENST00000573584 DUSP8Q13202 625 aa14.52□□□□□ -0.09
NUP88-207ENST00000573584 MAPK14Q16539 360 aa14.52□□□□□ -0.09
NUP88-207ENST00000573584 TOMM5Q8N4H5 51 aa14.52□□□□□ -0.09
NUP88-207ENST00000573584 C10orf90Q96M02 699 aa14.52□□□□□ -0.09
NUP88-207ENST00000573584 SDF2Q99470 211 aa14.52□□□□□ -0.09
NUP88-207ENST00000573584 ZFP64Q9NPA5 681 aa14.52□□□□□ -0.09
NUP88-207ENST00000573584 CMC2Q9NRP2 79 aa14.52□□□□□ -0.09
NUP88-207ENST00000573584 PHPT1Q9NRX4 125 aaPredicted RBP14.52□□□□□ -0.09
NUP88-207ENST00000573584 CLDND1Q9NY35 253 aa14.52□□□□□ -0.09
NUP88-207ENST00000573584 ZMIZ1Q9ULJ6 1067 aa14.52□□□□□ -0.09
NUP88-207ENST00000573584 TEX13CA0A0J9YWL9 993 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 LEUTXA8MZ59 168 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 RCBTB2O95199 551 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 TIMP1P01033 207 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 CD3GP09693 182 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 POU3F3P20264 500 aaPredicted RBP14.51□□□□□ -0.09
NUP88-207ENST00000573584 PER3P56645 1201 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 OR12D2P58182 307 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 OR1Q1Q15612 314 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 ACSM3Q53FZ2 586 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 RNASE12Q5GAN4 147 aaKnown RBP14.51□□□□□ -0.09
NUP88-207ENST00000573584 AGBL4Q5VU57 503 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 HACD4Q5VWC8 232 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 THSD4Q6ZMP0 1018 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 RNF113BQ8IZP6 322 aaKnown RBP14.51□□□□□ -0.09
NUP88-207ENST00000573584 GPR137Q96N19 417 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 TIMM29Q9BSF4 260 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 OR51J1Q9H342 316 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 EMC7Q9NPA0 242 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 NTMQ9P121 344 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 MRPS7Q9Y2R9 242 aaKnown RBP14.51□□□□□ -0.09
NUP88-207ENST00000573584 INSL6Q9Y581 213 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 NUBP2Q9Y5Y2 271 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 SYNDIG1LA6NDD5 238 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 PRR23AA6NEV1 266 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 ZNF888P0CJ79 500 aaPredicted RBP14.51□□□□□ -0.09
NUP88-207ENST00000573584 SAGP10523 405 aaPredicted RBP14.51□□□□□ -0.09
NUP88-207ENST00000573584 GIFP27352 417 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 CTNNB1P35222 781 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 HTRA4P83105 476 aaPredicted RBP14.51□□□□□ -0.09
NUP88-207ENST00000573584 PXKQ7Z7A4 578 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 ASPGQ86U10 573 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 CDK20Q8IZL9 346 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 ZFP3Q96NJ6 502 aa14.51□□□□□ -0.09
NUP88-207ENST00000573584 SBK2P0C263 348 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 CLUP10909 449 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 ANXA3P12429 323 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 NOS3P29474 1203 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 TAS2R43P59537 309 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 RPE65Q16518 533 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 C1orf53Q5VUE5 145 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 ZNF425Q6IV72 752 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 TEX261Q6UWH6 196 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 OR2L13Q8N349 312 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 BMPERQ8N8U9 685 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 OR13C2Q8NGS9 318 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 DOK4Q8TEW6 326 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 ZNF707Q96C28 371 aaPredicted RBP14.5□□□□□ -0.09
NUP88-207ENST00000573584 SLCO1C1Q9NYB5 712 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 U3KQ87 197 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 LOC105369274A0A096LPK9 316 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 ZSCAN5BA6NJL1 495 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 THBS1P07996 1170 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 IL9P15248 144 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 CXCL3P19876 107 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 RAB3BP20337 219 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 PYCR1P32322 319 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 WASP42768 502 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 SNRPNP63162 240 aaKnown RBP14.5□□□□□ -0.09
NUP88-207ENST00000573584 FGL2Q14314 439 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 SIAH3Q8IW03 269 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 OR4N4Q8N0Y3 316 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 OR4K14Q8NGD5 310 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 SPPL3Q8TCT6 385 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 GHSRQ92847 366 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 TRIM43Q96BQ3 446 aaPredicted RBP14.5□□□□□ -0.09
NUP88-207ENST00000573584 BPIFA2Q96DR5 249 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 PGLYRP3Q96LB9 341 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 SMAD5Q99717 465 aaKnown RBP14.5□□□□□ -0.09
NUP88-207ENST00000573584 CACNG6Q9BXT2 260 aa14.5□□□□□ -0.09
NUP88-207ENST00000573584 CDHR4A6H8M9 788 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 MEN1O00255 615 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 NARSO43776 548 aaKnown RBP14.49□□□□□ -0.09
NUP88-207ENST00000573584 SC5DO75845 299 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 SLC22A5O76082 557 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 CEACAM5P06731 702 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 LAMP2P13473 410 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 NUDT1P36639 197 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 SIM1P81133 766 aaPredicted RBP14.49□□□□□ -0.09
NUP88-207ENST00000573584 ZNF85Q03923 595 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 MRPL2Q5T653 305 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms