RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 P2RX2Q9UBL9 471 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 PLEKHB1Q9UF11 243 aaPredicted RBP6.31□□□□□ -1.4
SMG6-209ENST00000571442 ACAD8Q9UKU7 415 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 MRPS18CQ9Y3D5 142 aaKnown RBP6.31□□□□□ -1.4
SMG6-209ENST00000571442 PCDHGB3Q9Y5G1 929 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 CACNA1CQ13936 2221 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 A0A1B0GUH1 482 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 E9PLN8 166 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 H3BML4 177 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 BCKDKO14874 412 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 ZNF264O43296 627 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 FRS3O43559 492 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 TPST1O60507 370 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 SHOX2O60902 331 aaPredicted RBP6.3□□□□□ -1.4
SMG6-209ENST00000571442 CYP7B1O75881 506 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 SOX30O94993 753 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 PGM3O95394 542 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 NTN1O95631 604 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 AGR2O95994 175 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 CSTAP01040 98 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 GKN3PP0CG01 181 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 GLI4P10075 376 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 UBL4AP11441 157 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 COX4I1P13073 169 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 PRG2P13727 222 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 HPGDP15428 266 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 PRKCAP17252 672 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 KLK2P20151 261 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 CHMP24386 653 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 ACVR2AP27037 513 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 COL8A1P27658 744 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 GRNP28799 593 aaKnown RBP6.3□□□□□ -1.4
SMG6-209ENST00000571442 AQP1P29972 269 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 CPA2P48052 419 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 CLK3P49761 638 aaKnown RBP6.3□□□□□ -1.4
SMG6-209ENST00000571442 P2RX1P51575 399 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 CCR4P51679 360 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 CDK6Q00534 326 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 PMPCAQ10713 525 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 FADDQ13158 208 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 CYLC2Q14093 348 aaPredicted RBP6.3□□□□□ -1.4
SMG6-209ENST00000571442 QPRTQ15274 297 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 ZNF630Q2M218 657 aaPredicted RBP6.3□□□□□ -1.4
SMG6-209ENST00000571442 CTU2Q2VPK5 515 aaKnown RBP6.3□□□□□ -1.4
SMG6-209ENST00000571442 TRMT5Q32P41 509 aaKnown RBP6.3□□□□□ -1.4
SMG6-209ENST00000571442 ACSF3Q4G176 576 aaPredicted RBP6.3□□□□□ -1.4
SMG6-209ENST00000571442 MRPL2Q5T653 305 aaKnown RBP6.3□□□□□ -1.4
SMG6-209ENST00000571442 C1orf185Q5T7R7 199 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 WLSQ5T9L3 541 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 C8orf82Q6P1X6 216 aaPredicted RBP6.3□□□□□ -1.4
SMG6-209ENST00000571442 NET1Q7Z628 596 aaPredicted RBP6.3□□□□□ -1.4
SMG6-209ENST00000571442 MTERF4Q7Z6M4 381 aaKnown RBP6.3□□□□□ -1.4
SMG6-209ENST00000571442 CPLX4Q7Z7G2 160 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 ADGRE4PQ86SQ3 457 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 CALHM3Q86XJ0 350 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 CCDC71Q8IV32 467 aaPredicted RBP6.3□□□□□ -1.4
SMG6-209ENST00000571442 LIX1LQ8IVB5 337 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 MISPQ8IVT2 679 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 GTPBP8Q8N3Z3 284 aaPredicted RBP6.3□□□□□ -1.4
SMG6-209ENST00000571442 TMCO5AQ8N6Q1 288 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 C9orf106Q8NAJ2 232 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 ZNF527Q8NB42 609 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 TNIP2Q8NFZ5 429 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 OR52P1PQ8NH57 321 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 OR5W2Q8NH69 310 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 OR10A6Q8NH74 314 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 FBXO27Q8NI29 283 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 WDR60Q8WVS4 1066 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 SMPDL3BQ92485 455 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 SARAFQ96BY9 339 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 ZNF845Q96IR2 970 aaPredicted RBP6.3□□□□□ -1.4
SMG6-209ENST00000571442 ADGRG7Q96K78 797 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 CCT8L2Q96SF2 557 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 VKORC1Q9BQB6 163 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 GPATCH1Q9BRR8 931 aaKnown RBP6.3□□□□□ -1.4
SMG6-209ENST00000571442 TTYH2Q9BSA4 534 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 THUMPD3Q9BV44 507 aaKnown RBP6.3□□□□□ -1.4
SMG6-209ENST00000571442 PRR14Q9BWN1 585 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 LAT2Q9GZY6 243 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 TP63Q9H3D4 680 aaPredicted RBP6.3□□□□□ -1.4
SMG6-209ENST00000571442 TMEM38AQ9H6F2 299 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 TMEM185BQ9H7F4 350 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 BCL2L10Q9HD36 194 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 POLE3Q9NRF9 147 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 SDHAF3Q9NRP4 125 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 ARL8BQ9NVJ2 186 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 CMTM6Q9NX76 183 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 SUCOQ9UBS9 1254 aaKnown RBP6.3□□□□□ -1.4
SMG6-209ENST00000571442 ADAM21Q9UKJ8 722 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 CAMK2AQ9UQM7 478 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 LIPT1Q9Y234 373 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 ZNF443Q9Y2A4 671 aaPredicted RBP6.3□□□□□ -1.4
SMG6-209ENST00000571442 MPDZO75970 2070 aa6.3□□□□□ -1.4
SMG6-209ENST00000571442 INTS1Q8N201 2190 aaKnown RBP6.3□□□□□ -1.4
SMG6-209ENST00000571442 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 A0A0G2JNJ9 132 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 A0A0J9YW62 118 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 C7orf72A4D263 438 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 CDHR4A6H8M9 788 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 CCT8L1PA6NM43 557 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms