RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 ELF3P78545 371 aaPredicted RBP6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 SPIBQ01892 262 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 PLGLB1Q02325 96 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 ZNF117Q03924 483 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 C17orf67Q0P5P2 114 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 SKP2Q13309 424 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 CBFBQ13951 182 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 TOMM20Q15388 145 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 CD226Q15762 336 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 MAPK14Q16539 360 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 KLHL26Q53HC5 615 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 BICRALQ6AI39 1079 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 TMEM81Q6P7N7 255 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 C1orf229Q6ZS94 237 aaPredicted RBP6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 ZDHHC21Q8IVQ6 265 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 ADGRG5Q8IZF4 528 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 CADM2Q8N3J6 435 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 FAM86B1Q8N7N1 296 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 OR10Q1Q8NGQ4 319 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 B4GALNT2Q8NHY0 566 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 CANT1Q8WVQ1 401 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 PYDC1Q8WXC3 89 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 NR4A3Q92570 626 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 SLC35B4Q969S0 331 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 SDCCAG3Q96C92 435 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 ZNF347Q96SE7 839 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 ARHGDIGQ99819 225 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 FAM173AQ9BQD7 235 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 ZNF559Q9BR84 538 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 ZNF552Q9H707 407 aaPredicted RBP6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 KRCC1Q9NPI7 259 aaPredicted RBP6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 EXOSC3Q9NQT5 275 aaKnown RBP6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 KLHL1Q9NR64 748 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 DNAJB12Q9NXW2 375 aaKnown RBP6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 PLA2G3Q9NZ20 509 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 CARD8Q9Y2G2 431 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 AP4S1Q9Y587 144 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 PCDHGB7Q9Y5F8 929 aa6.02□□□□□ -1.45
CTDNEP1-204ENST00000570484 CFAP54Q96N23 3096 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 PCNX2A6NKB5 2137 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 ANKRD33BA6NCL7 494 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 CPSF4LA6NMK7 179 aaKnown RBP6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 H0Y3Z8 333 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 GNB5O14775 395 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 HNRNPRO43390 633 aaKnown RBP6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 FRS3O43559 492 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 NME2P1O60361 137 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 FADS1O60427 444 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 FMO6PO60774 539 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 DEAF1O75398 565 aaPredicted RBP6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 GCM2O75603 506 aaPredicted RBP6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 CEACAM4O75871 244 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 KRT36O76013 467 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 BAG2O95816 211 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 LGI1O95970 557 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 CST1P01037 141 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 LDLRP01130 860 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 MT-ND1P03886 318 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 LINGO3P0C6S8 592 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 EPXP11678 715 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 NME2P22392 152 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 FASP25445 335 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 GDF1P27539 372 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 CD96P40200 585 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 ADH7P40394 386 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 DNASE1L1P49184 302 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 P2RX1P51575 399 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 ARHGDIAP52565 204 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 CRYBA2P53672 197 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 SMIM11AP58511 58 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 KCNAB2Q13303 367 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 GANABQ14697 944 aaKnown RBP6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 RCN1Q15293 331 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 TBR1Q16650 682 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 NRF1Q16656 503 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 DUSP7Q16829 419 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 COL28A1Q2UY09 1125 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 NDUFAF6Q330K2 333 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 GLIPR1L2Q4G1C9 344 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 ZNF766Q5HY98 468 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 FGD3Q5JSP0 725 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 SPINK14Q6IE38 97 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 SLC25A25Q6KCM7 469 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 AAGABQ6PD74 315 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 MDGA2Q7Z553 956 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 PLCZ1Q86YW0 608 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 GRAMD2AQ8IUY3 354 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 CLIP4Q8N3C7 705 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 PIK3C3Q8NEB9 887 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 FAM71CQ8NEG0 241 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 GPR32P1Q8NGA4 272 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 OR1J4Q8NGS1 313 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 OR5W2Q8NH69 310 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 C9orf43Q8TAL5 461 aaPredicted RBP6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 DUSP19Q8WTR2 217 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 PHF10Q8WUB8 498 aaKnown RBP6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 TMEM234Q8WY98 164 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 CNOT9Q92600 299 aaKnown RBP6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 EXTL1Q92935 676 aa6.01□□□□□ -1.45
CTDNEP1-204ENST00000570484 ZG16BQ96DA0 208 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms