RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 ZNHIT3Q15649 155 aaPredicted RBP9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 GABRA6Q16445 453 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 GGTA1PQ4G0N0 100 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 GLE1Q53GS7 698 aaKnown RBP9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 FBXW9Q5XUX1 488 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 METTL2BQ6P1Q9 378 aaKnown RBP9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 THSD4Q6ZMP0 1018 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 SLC46A3Q7Z3Q1 461 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 GALNT5Q7Z7M9 940 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 ZBED8Q8IZ13 594 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 OR2L13Q8N349 312 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 SVOPLQ8N434 492 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 ATP6V1C2Q8NEY4 427 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 OR4F6Q8NGB9 312 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 SELENOMQ8WWX9 145 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 CDKL2Q92772 493 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 MUS81Q96NY9 551 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 BBS4Q96RK4 519 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 BRF2Q9HAW0 419 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 CPSF2Q9P2I0 782 aaKnown RBP9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 MCM8Q9UJA3 840 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 MOKQ9UQ07 419 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 WNK2Q9Y3S1 2297 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 GOLGA6L10A0A0M3HER8 536 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 TCRBV9S1A1TA0A576 114 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 FAM159BA6NKW6 160 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 B4DSR2 109 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 PPP6CO00743 305 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 SNUPNO95149 360 aaKnown RBP9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 KCNH1O95259 989 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 DAOP14920 347 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 PGCP20142 388 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 CRABP2P29373 138 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 SERPINF1P36955 418 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 NCBP2P52298 156 aaKnown RBP eCLIP9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 SLC25A3Q00325 362 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 SCGB2A2Q13296 93 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 CCNIQ14094 377 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 CD226Q15762 336 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 GRTP1Q5TC63 336 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 UGT2A3Q6UWM9 527 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 ZAR1Q86SH2 424 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 UBE2J2Q8N2K1 259 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 PTGR2Q8N8N7 351 aaPredicted RBP9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 SPC24Q8NBT2 197 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 B4GALNT2Q8NHY0 566 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 FBXO27Q8NI29 283 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 ACTRT1Q8TDG2 376 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 FBF1Q8TES7 1133 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 C16orf78Q8WTQ4 265 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 MRPL24Q96A35 216 aaKnown RBP9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 ELP4Q96EB1 424 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 C3orf14Q9HBI5 128 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 HHATLQ9HCP6 504 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 DDX18Q9NVP1 670 aaKnown RBP9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 VPS29Q9UBQ0 182 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 PCTPQ9UKL6 214 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 SPEF1Q9Y4P9 236 aa9.1□□□□□ -0.95
CTDNEP1-202ENST00000570380 PCDH7O60245 1069 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 SEC31AO94979 1220 aaKnown RBP9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 SLITRK5O94991 958 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 ITGA5P08648 1049 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 ARAFP10398 606 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 CHN1P15882 459 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 EPHA1P21709 976 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 NTF4P34130 210 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 MAP3K8P41279 467 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 IDH3GP51553 393 aaPredicted RBP9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 RIN1Q13671 783 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 HEPACAMQ14CZ8 416 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 FAM83EQ2M2I3 478 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 OR7E24Q6IFN5 339 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 LETMD1Q6P1Q0 360 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 SHQ1Q6PI26 577 aaKnown RBP9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 RPS27LQ71UM5 84 aaKnown RBP9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 GLCCI1Q86VQ1 547 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 NUP43Q8NFH3 380 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 GPR151Q8TDV0 419 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 PYROXD1Q8WU10 500 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 TMEM186Q96B77 213 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 ZNF524Q96C55 264 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 PHF21BQ96EK2 531 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 MRGPRX4Q96LA9 322 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 GPR78Q96P69 363 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 JMJD8Q96S16 334 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 SAP130Q9H0E3 1048 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 RAB1BQ9H0U4 201 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 PLK3Q9H4B4 646 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 ESM1Q9NQ30 184 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 HIF1ANQ9NWT6 349 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 NMRK1Q9NWW6 199 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 ASB6Q9NWX5 421 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 TAS2R16Q9NYV7 291 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 USP22Q9UPT9 525 aa9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 KMT2CQ8NEZ4 4911 aaKnown RBP9.09□□□□□ -0.95
CTDNEP1-202ENST00000570380 GNG14A0A1W2PPG7 69 aa9.08□□□□□ -0.96
CTDNEP1-202ENST00000570380 CCDC189A1A4V9 331 aa9.08□□□□□ -0.96
CTDNEP1-202ENST00000570380 TTC36A6NLP5 189 aa9.08□□□□□ -0.96
CTDNEP1-202ENST00000570380 B9A039 149 aa9.08□□□□□ -0.96
CTDNEP1-202ENST00000570380 KIF2AO00139 706 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms