RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 SLC1A6P48664 564 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 AMTP48728 403 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 CSNK1DP48730 415 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 AIF1P55008 147 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 SH3BGRP55822 239 aaPredicted RBP2.87□□□□□ -1.95
CNOT1-221ENST00000569924 ATP5IP56385 69 aaPredicted RBP2.87□□□□□ -1.95
CNOT1-221ENST00000569924 STX17P56962 302 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 KCNK10P57789 538 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 ACTR3P61158 418 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 RHOAP61586 193 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 RPS18P62269 152 aaKnown RBP2.87□□□□□ -1.95
CNOT1-221ENST00000569924 PLP2Q04941 152 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 TRAP1Q12931 704 aaKnown RBP2.87□□□□□ -1.95
CNOT1-221ENST00000569924 FOXF2Q12947 444 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 IFT88Q13099 833 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 DAZAP2Q15038 168 aaPredicted RBP2.87□□□□□ -1.95
CNOT1-221ENST00000569924 EXOC3L4Q17RC7 722 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 KLHL40Q2TBA0 621 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 C14orf28Q4W4Y0 310 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 CEP78Q5JTW2 689 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 TRNP1Q6NT89 227 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 METAP1DQ6UB28 335 aaPredicted RBP2.87□□□□□ -1.95
CNOT1-221ENST00000569924 FIP1L1Q6UN15 594 aaKnown RBP2.87□□□□□ -1.95
CNOT1-221ENST00000569924 ZNF782Q6ZMW2 699 aaPredicted RBP2.87□□□□□ -1.95
CNOT1-221ENST00000569924 STRADAQ7RTN6 431 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 ERASQ7Z444 233 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 SPRED1Q7Z699 444 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 SLC47A2Q86VL8 602 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 C17orf82Q86X59 251 aaPredicted RBP2.87□□□□□ -1.95
CNOT1-221ENST00000569924 FAM131BQ86XD5 332 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 ZFAND4Q86XD8 727 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 SLC22A9Q8IVM8 553 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 SLC43A2Q8N370 569 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 BBS5Q8N3I7 341 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 Q8N9G6 341 aaPredicted RBP2.87□□□□□ -1.95
CNOT1-221ENST00000569924 OR56A4Q8NGH8 313 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 OR6K2Q8NGY2 324 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 ZNF671Q8TAW3 534 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 GIPC3Q8TF64 312 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 HTR3CQ8WXA8 447 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 PHYHIPQ92561 330 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 GIMAP5Q96F15 307 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 HMCESQ96FZ2 354 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 OXNAD1Q96HP4 312 aaPredicted RBP2.87□□□□□ -1.95
CNOT1-221ENST00000569924 URB1-AS1Q96HZ7 61 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 RBM41Q96IZ5 413 aaKnown RBP2.87□□□□□ -1.95
CNOT1-221ENST00000569924 TXNDC15Q96J42 360 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 C4orf36Q96KX1 117 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 ZNF641Q96N77 438 aaPredicted RBP2.87□□□□□ -1.95
CNOT1-221ENST00000569924 CSF3RQ99062 836 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 SLC25A33Q9BSK2 321 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 APOOQ9BUR5 198 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 TBC1D10AQ9BXI6 508 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 KRTAP3-1Q9BYR8 98 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 TM6SF2Q9BZW4 377 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 TRIM4Q9C037 500 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 RNF121Q9H920 327 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 PLAC1Q9HBJ0 212 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 SIX2Q9NPC8 291 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 GLRX2Q9NS18 164 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 OR12D3Q9UGF7 316 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 RWDD2AQ9UIY3 292 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 DNAJC12Q9UKB3 198 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 PACSIN3Q9UKS6 424 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 FOXJ3Q9UPW0 622 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 NEU3Q9UQ49 428 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 ARHGEF17Q96PE2 2063 aaPredicted RBP2.87□□□□□ -1.95
CNOT1-221ENST00000569924 SDK2Q58EX2 2172 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 CREBBPQ92793 2442 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 COL12A1Q99715 3063 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 A0A0G2JNG1 304 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 CCDC162PA2VCL2 907 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 MFSD2BA6NFX1 497 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 TMEM191CA6NGB0 347 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 A8MUI8 341 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 E5RGE8 158 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 FAM72CH0Y354 149 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 GOLGA8SH3BPF8 625 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 CCL24O00175 119 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 CYR61O00622 381 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 INSIG1O15503 277 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 ZNHIT1O43257 154 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 BUB1O43683 1085 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 SNNO75324 88 aaPredicted RBP2.86□□□□□ -1.95
CNOT1-221ENST00000569924 YES1P07947 543 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 PLEKP08567 350 aaPredicted RBP2.86□□□□□ -1.95
CNOT1-221ENST00000569924 HIST1H2AGP0C0S8 130 aaPredicted RBP2.86□□□□□ -1.95
CNOT1-221ENST00000569924 CT45A8P0DMV1 189 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 CT45A9P0DMV2 189 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 IGHV4-30-4P0DP06 118 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 CCL4P13236 92 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 GP9P14770 177 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 CYP11B1P15538 503 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 ZNF20P17024 532 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 CERS1P27544 350 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 TEAD1P28347 426 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 SSTR2P30874 369 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 SDC4P31431 198 aa2.86□□□□□ -1.95
CNOT1-221ENST00000569924 CHI3L1P36222 383 aaPredicted RBP2.86□□□□□ -1.95
CNOT1-221ENST00000569924 TRIM23P36406 574 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms