RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	PRM3	Q9NNZ6	103 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	ISYNA1	Q9NPH2	558 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	SDHAF2	Q9NX18	166 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	FANCM	Q8IYD8	2048 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	TRIO	O75962	3097 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	TEX13C	A0A0J9YWL9	993 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	RNASET2	O00584	256 aa	Known RBP	11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	FFAR1	O14842	300 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	LANCL1	O43813	399 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	GBA	P04062	536 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	SFTPC	P11686	197 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	ELK1	P19419	428 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	HNRNPA2B1	P22626	353 aa	Known RBP	11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	BTC	P35070	178 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	HBA1	P69905	142 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	CRYZ	Q08257	329 aa	Known RBP	11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	C2orf80	Q0P641	193 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	RPE65	Q16518	533 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	ZNF630	Q2M218	657 aa	Predicted RBP	11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	TRIM40	Q6P9F5	258 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	TMEM91	Q6ZNR0	172 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	IQCF1	Q8N6M8	205 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	OR4K1	Q8NGD4	311 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	HMGB4	Q8WW32	186 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	WBP1	Q96G27	269 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	LRR1	Q96L50	414 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	DPYSL5	Q9BPU6	564 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	PHF7	Q9BWX1	381 aa	Predicted RBP	11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	C1QTNF6	Q9BXI9	259 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	DPAGT1	Q9H3H5	408 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	CDCP1	Q9H5V8	836 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	XKR8	Q9H6D3	395 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	ZSCAN32	Q9NX65	697 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	ZNF624	Q9P2J8	865 aa	Predicted RBP	11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	ICK	Q9UPZ9	632 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	ANGPT4	Q9Y264	503 aa		11.17	□□□□□ -0.62
SPG7-222	ENST00000569820	TRIOBP	Q9H2D6	2365 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	LOC105369274	A0A096LPK9	316 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	IGKV1-8	A0A0C4DH67	115 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	CHI3L1	P36222	383 aa	Predicted RBP	11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	GDI2	P50395	445 aa	Known RBP	11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	CCR8	P51685	355 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	LIM2	P55344	173 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	EEF1A2	Q05639	463 aa	Known RBP	11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	LRRC74A	Q0VAA2	488 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	SEC23B	Q15437	767 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	ZNF385B	Q569K4	471 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	DCST1	Q5T197	706 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	KRT74	Q7RTS7	529 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	MARCH9	Q86YJ5	346 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	OR4N4	Q8N0Y3	316 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	RAB42	Q8N4Z0	105 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	OR52E1	Q8NGJ3	308 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	OR2A1	Q8NGT9	310 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	OR2L8	Q8NGY9	312 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	WDR92	Q96MX6	357 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	ERMAP	Q96PL5	475 aa	Predicted RBP	11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	AIF1L	Q9BQI0	150 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	TMED9	Q9BVK6	235 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	RAB11FIP5	Q9BXF6	653 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	POLDIP3	Q9BY77	421 aa	Known RBP	11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	MVB12B	Q9H7P6	319 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	ENAM	Q9NRM1	1142 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	C1GALT1	Q9NS00	363 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	SEMA3G	Q9NS98	782 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	HCN3	Q9P1Z3	774 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	USP36	Q9P275	1121 aa	Known RBP	11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	ACSL6	Q9UKU0	697 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	KCNK7	Q9Y2U2	307 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	MAP4K5	Q9Y4K4	846 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	NUBP2	Q9Y5Y2	271 aa		11.16	□□□□□ -0.62
SPG7-222	ENST00000569820	MEIKIN	A0A087WXM9	373 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	RAB19	A4D1S5	217 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820		H7BY64	318 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	GPR171	O14626	319 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	EML2	O95834	649 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	RECK	O95980	971 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	SYP	P08247	313 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	VSX2	P58304	361 aa	Predicted RBP	11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	SGCA	Q16586	387 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	C5orf46	Q6UWT4	87 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	ENPP7	Q6UWV6	458 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	OR2T4	Q8NH00	348 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	CXorf40B	Q96DE9	158 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	ZNF582	Q96NG8	517 aa	Predicted RBP	11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	PRAP1	Q96NZ9	151 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	SORBS1	Q9BX66	1292 aa	Known RBP	11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	MS4A8	Q9BY19	250 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	RNF32	Q9H0A6	362 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	TBC1D17	Q9HA65	648 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	MYNN	Q9NPC7	610 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	DLL4	Q9NR61	685 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	SLC2A4RG	Q9NR83	387 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	POLE3	Q9NRF9	147 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	ACTR10	Q9NZ32	417 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	TBC1D29	Q9UFV1	150 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	SCP2D1	Q9UJQ7	156 aa		11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	PPIE	Q9UNP9	301 aa	Known RBP	11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	RPH3A	Q9Y2J0	694 aa	Predicted RBP	11.15	□□□□□ -0.62
SPG7-222	ENST00000569820	PCDHGA9	Q9Y5G4	932 aa	Known RBP	11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms