RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 PROCRQ9UNN8 238 aa9.34□□□□□ -0.91
UBR1-207ENST00000568782 LIPT1Q9Y234 373 aa9.34□□□□□ -0.91
UBR1-207ENST00000568782 SLC35A3Q9Y2D2 325 aa9.34□□□□□ -0.91
UBR1-207ENST00000568782 NPIPA5A0A0B4J1W7 369 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 SERINC4A6NH21 518 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 A8MXE2 369 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 HMGB1P1B2RPK0 211 aaPredicted RBP9.33□□□□□ -0.92
UBR1-207ENST00000568782 NPIPA7E9PJI5 369 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 TGDSO95455 350 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 NPIPA8P0DM63 369 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 UQCRBP14927 111 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 SFTPDP35247 375 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 CASP9P55211 416 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 SIRPAP78324 504 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 CD226Q15762 336 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 PDCD4Q53EL6 469 aaKnown RBP9.33□□□□□ -0.92
UBR1-207ENST00000568782 TMEM201Q5SNT2 666 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 TNFAIP8L2Q6P589 184 aaPredicted RBP9.33□□□□□ -0.92
UBR1-207ENST00000568782 POMZP3Q6PJE2 187 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 CLEC4FQ8N1N0 589 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 MIER2Q8N344 545 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 ATP6V1C2Q8NEY4 427 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 OR5W2Q8NH69 310 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 OR10D3Q8NH80 312 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 OR2V1Q8NHB1 315 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 ZNF563Q8TA94 476 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 FIG4Q92562 907 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 OSTF1Q92882 214 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 CPNE4Q96A23 557 aaPredicted RBP9.33□□□□□ -0.92
UBR1-207ENST00000568782 ROPN1LQ96C74 230 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 NEURL3Q96EH8 262 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 GMPPAQ96IJ6 420 aaPredicted RBP9.33□□□□□ -0.92
UBR1-207ENST00000568782 KLHL15Q96M94 604 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 LAT2Q9GZY6 243 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 CLEC4MQ9H2X3 399 aaPredicted RBP9.33□□□□□ -0.92
UBR1-207ENST00000568782 TMEM185BQ9H7F4 350 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 RNF122Q9H9V4 155 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.33□□□□□ -0.92
UBR1-207ENST00000568782 GALNT8Q9NY28 637 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 ZNF226Q9NYT6 803 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 JKAMPQ9P055 326 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 GPR45Q9Y5Y3 372 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 SPIN1Q9Y657 262 aaPredicted RBP9.33□□□□□ -0.92
UBR1-207ENST00000568782 KCNE3Q9Y6H6 103 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 USH1CQ9Y6N9 552 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 TEX15Q9BXT5 2789 aa9.33□□□□□ -0.92
UBR1-207ENST00000568782 A6NNC1 897 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 SHISA8B8ZZ34 492 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 ZNF195O14628 629 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 TNFSF11O14788 317 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 ANKRD28O15084 1053 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 CXCL13O43927 109 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 CTAG2O75638 210 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 OPN1LWP04000 364 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 GUSBP08236 651 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 ALDOCP09972 364 aaKnown RBP9.32□□□□□ -0.92
UBR1-207ENST00000568782 LINGO3P0C6S8 592 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 UBTFL6P0CB48 400 aaPredicted RBP9.32□□□□□ -0.92
UBR1-207ENST00000568782 NR2F1P10589 423 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 POU2F1P14859 743 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 IL7RP16871 459 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 FKBP2P26885 142 aaKnown RBP9.32□□□□□ -0.92
UBR1-207ENST00000568782 CD79BP40259 229 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 MAGEA8P43361 318 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 SELENBP1Q13228 472 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 DAZAP2Q15038 168 aaPredicted RBP9.32□□□□□ -0.92
UBR1-207ENST00000568782 RNPS1Q15287 305 aaKnown RBP9.32□□□□□ -0.92
UBR1-207ENST00000568782 ZNF141Q15928 474 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 TMEM44Q2T9K0 475 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 TMEM176BQ3YBM2 270 aaPredicted RBP9.32□□□□□ -0.92
UBR1-207ENST00000568782 C6orf10Q5SRN2 563 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 SAXO2Q658L1 398 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 PLXDC2Q6UX71 529 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 FAM214BQ7L5A3 538 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 RNF130Q86XS8 419 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 LURAP1LQ8IV03 231 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 ZNF619Q8N2I2 560 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 FBXO27Q8NI29 283 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 LINC01560Q8TB33 94 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 GPR119Q8TDV5 335 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 ST8SIA1Q92185 356 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 PMM1Q92871 262 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 RAB8BQ92930 207 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 ITCHQ96J02 903 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 C7orf26Q96N11 449 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 DACH2Q96NX9 599 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 GPATCH1Q9BRR8 931 aaKnown RBP9.32□□□□□ -0.92
UBR1-207ENST00000568782 MED18Q9BUE0 208 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 THUMPD3Q9BV44 507 aaKnown RBP9.32□□□□□ -0.92
UBR1-207ENST00000568782 ZNF350Q9GZX5 532 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 RAD21L1Q9H4I0 556 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 ARMC7Q9H6L4 198 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 RASSF1Q9NS23 344 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 INTS9Q9NV88 658 aaKnown RBP9.32□□□□□ -0.92
UBR1-207ENST00000568782 THUMPD1Q9NXG2 353 aaKnown RBP9.32□□□□□ -0.92
UBR1-207ENST00000568782 CALML5Q9NZT1 146 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 ZIM2Q9NZV7 527 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 ICAM5Q9UMF0 924 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 APCP25054 2843 aa9.32□□□□□ -0.92
UBR1-207ENST00000568782 DCHS2Q6V1P9 2916 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms