RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 GPR50Q13585 617 aa8.93□□□□□ -0.98
TCF4-240ENST00000568673 CARTPTQ16568 116 aa8.93□□□□□ -0.98
TCF4-240ENST00000568673 SLC35F1Q5T1Q4 408 aa8.93□□□□□ -0.98
TCF4-240ENST00000568673 ARMC4Q5T2S8 1044 aa8.93□□□□□ -0.98
TCF4-240ENST00000568673 NIPAL3Q6P499 406 aa8.93□□□□□ -0.98
TCF4-240ENST00000568673 GRAMD2AQ8IUY3 354 aa8.93□□□□□ -0.98
TCF4-240ENST00000568673 CAMKK1Q8N5S9 505 aa8.93□□□□□ -0.98
TCF4-240ENST00000568673 GDPD1Q8N9F7 314 aa8.93□□□□□ -0.98
TCF4-240ENST00000568673 ZDHHC1Q8WTX9 485 aa8.93□□□□□ -0.98
TCF4-240ENST00000568673 DNAJA4Q8WW22 397 aaPredicted RBP8.93□□□□□ -0.98
TCF4-240ENST00000568673 CNOT9Q92600 299 aaKnown RBP8.93□□□□□ -0.98
TCF4-240ENST00000568673 PTP4A1Q93096 173 aa8.93□□□□□ -0.98
TCF4-240ENST00000568673 NACC2Q96BF6 587 aa8.93□□□□□ -0.98
TCF4-240ENST00000568673 ABHD8Q96I13 439 aa8.93□□□□□ -0.98
TCF4-240ENST00000568673 LMF2Q9BU23 707 aaKnown RBP8.93□□□□□ -0.98
TCF4-240ENST00000568673 TMED9Q9BVK6 235 aa8.93□□□□□ -0.98
TCF4-240ENST00000568673 TBC1D17Q9HA65 648 aa8.93□□□□□ -0.98
TCF4-240ENST00000568673 MEPEQ9NQ76 525 aaPredicted RBP8.93□□□□□ -0.98
TCF4-240ENST00000568673 TIGARQ9NQ88 270 aa8.93□□□□□ -0.98
TCF4-240ENST00000568673 CMC2Q9NRP2 79 aa8.93□□□□□ -0.98
TCF4-240ENST00000568673 CYP8B1Q9UNU6 501 aa8.93□□□□□ -0.98
TCF4-240ENST00000568673 A0A0B4J2E0 115 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 A0A1B0GX12 115 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 TMEM221A6NGB7 291 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 C12orf71A8MTZ7 269 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 GABRPO00591 440 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 CHP2O43745 196 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 SSX4O60224 188 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 SRPX2O60687 465 aaPredicted RBP8.92□□□□□ -0.98
TCF4-240ENST00000568673 PTP4A3O75365 173 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 SAGP10523 405 aaPredicted RBP8.92□□□□□ -0.98
TCF4-240ENST00000568673 ZNHIT3Q15649 155 aaPredicted RBP8.92□□□□□ -0.98
TCF4-240ENST00000568673 DEFB110Q30KQ9 67 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 LRIT3Q3SXY7 679 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 PDZK1Q5T2W1 519 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 VASNQ6EMK4 673 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 B3GLCTQ6Y288 498 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 THSD4Q6ZMP0 1018 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 SPATC1Q76KD6 591 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 KLBQ86Z14 1044 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 MCATQ8IVS2 390 aaKnown RBP8.92□□□□□ -0.98
TCF4-240ENST00000568673 CELF2-AS1Q8N7Q2 184 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 C19orf47Q8N9M1 422 aaKnown RBP8.92□□□□□ -0.98
TCF4-240ENST00000568673 NEIL3Q8TAT5 605 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 RBM18Q96H35 190 aaKnown RBP8.92□□□□□ -0.98
TCF4-240ENST00000568673 DCLRE1CQ96SD1 692 aaKnown RBP8.92□□□□□ -0.98
TCF4-240ENST00000568673 GPR174Q9BXC1 333 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 CAPN10Q9HC96 672 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 BABAM2Q9NXR7 383 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 POLHQ9Y253 713 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 SSUH2Q9Y2M2 353 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 PRUNE2Q8WUY3 3088 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 SLC22A31A6NKX4 558 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 C2CD4DB7Z1M9 353 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 SEC14L5O43304 696 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 DYRK3O43781 588 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 HCN1O60741 890 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 RFPL3O75679 317 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 AZGP1P25311 298 aaKnown RBP8.92□□□□□ -0.98
TCF4-240ENST00000568673 ACAA2P42765 397 aaKnown RBP8.92□□□□□ -0.98
TCF4-240ENST00000568673 RFX2P48378 723 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 RFX3P48380 749 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 EMDP50402 254 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 CAV3P56539 151 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 PRTGQ2VWP7 1150 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 ZNF362Q5T0B9 420 aaPredicted RBP8.92□□□□□ -0.98
TCF4-240ENST00000568673 AGAP6Q5VW22 663 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 ZC3H14Q6PJT7 736 aaKnown RBP8.92□□□□□ -0.98
TCF4-240ENST00000568673 LSRQ86X29 649 aaPredicted RBP8.92□□□□□ -0.98
TCF4-240ENST00000568673 LSMEM1Q8N8F7 131 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 SLC37A3Q8NCC5 494 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 ATP6V1C2Q8NEY4 427 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 OR13C2Q8NGS9 318 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 GRHL3Q8TE85 626 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 RIT1Q92963 219 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 KIAA1143Q96AT1 154 aaPredicted RBP8.92□□□□□ -0.98
TCF4-240ENST00000568673 AGAP4Q96P64 663 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 GAS2L1Q99501 681 aaPredicted RBP8.92□□□□□ -0.98
TCF4-240ENST00000568673 TEAD3Q99594 435 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 ZNF426Q9BUY5 554 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 IFT27Q9BW83 186 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 HCAR1Q9BXC0 346 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 TRIM2Q9C040 744 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 MED20Q9H944 212 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 ISG20L2Q9H9L3 353 aaKnown RBP8.92□□□□□ -0.98
TCF4-240ENST00000568673 FOLH1BQ9HBA9 442 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 WSB2Q9NYS7 404 aaPredicted RBP8.92□□□□□ -0.98
TCF4-240ENST00000568673 FLRT3Q9NZU0 649 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 GRIP1Q9Y3R0 1128 aa8.92□□□□□ -0.98
TCF4-240ENST00000568673 USP34Q70CQ2 3546 aa8.91□□□□□ -0.98
TCF4-240ENST00000568673 A0A0A6YYC8 382 aaPredicted RBP8.91□□□□□ -0.98
TCF4-240ENST00000568673 A0A1B0GWA3 101 aa8.91□□□□□ -0.98
TCF4-240ENST00000568673 A0A1W2PPC4 97 aa8.91□□□□□ -0.98
TCF4-240ENST00000568673 A0A1W2PQ09 198 aa8.91□□□□□ -0.98
TCF4-240ENST00000568673 SMIM30A4D0T7 59 aa8.91□□□□□ -0.98
TCF4-240ENST00000568673 SLC9B1P1A6NJY1 282 aa8.91□□□□□ -0.98
TCF4-240ENST00000568673 PRR23D1E9PI22 279 aaPredicted RBP8.91□□□□□ -0.98
TCF4-240ENST00000568673 I3L1I5 382 aaPredicted RBP8.91□□□□□ -0.98
TCF4-240ENST00000568673 POLR1CO15160 346 aaPredicted RBP8.91□□□□□ -0.98
TCF4-240ENST00000568673 CTNSO60931 367 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms