RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 PEPDP12955 493 aa12.37□□□□□ -0.43
SPG7-215ENST00000566682 IL7RP16871 459 aa12.37□□□□□ -0.43
SPG7-215ENST00000566682 ZNF708P17019 499 aa12.37□□□□□ -0.43
SPG7-215ENST00000566682 RPS4Y1P22090 263 aaKnown RBP12.37□□□□□ -0.43
SPG7-215ENST00000566682 PTGER4P35408 488 aa12.37□□□□□ -0.43
SPG7-215ENST00000566682 PGM1P36871 562 aa12.37□□□□□ -0.43
SPG7-215ENST00000566682 SMSP52788 366 aa12.37□□□□□ -0.43
SPG7-215ENST00000566682 SUMO3P55854 103 aaPredicted RBP12.37□□□□□ -0.43
SPG7-215ENST00000566682 CLDN18P56856 261 aa12.37□□□□□ -0.43
SPG7-215ENST00000566682 NUP107P57740 925 aa12.37□□□□□ -0.43
SPG7-215ENST00000566682 SKP2Q13309 424 aa12.37□□□□□ -0.43
SPG7-215ENST00000566682 CYLC2Q14093 348 aaPredicted RBP12.37□□□□□ -0.43
SPG7-215ENST00000566682 GNA13Q14344 377 aa12.37□□□□□ -0.43
SPG7-215ENST00000566682 TOMM34Q15785 309 aaPredicted RBP12.37□□□□□ -0.43
SPG7-215ENST00000566682 PLPPR5Q32ZL2 321 aa12.37□□□□□ -0.43
SPG7-215ENST00000566682 RPS26P11Q5JNZ5 115 aaPredicted RBP12.37□□□□□ -0.43
SPG7-215ENST00000566682 REP15Q6BDI9 236 aa12.37□□□□□ -0.43
SPG7-215ENST00000566682 RPTNQ6XPR3 784 aa12.37□□□□□ -0.43
SPG7-215ENST00000566682 MTDHQ86UE4 582 aaKnown RBP12.37□□□□□ -0.43
SPG7-215ENST00000566682 SNX32Q86XE0 403 aa12.37□□□□□ -0.43
SPG7-215ENST00000566682 TMCO5AQ8N6Q1 288 aa12.37□□□□□ -0.43
SPG7-215ENST00000566682 OR5W2Q8NH69 310 aa12.37□□□□□ -0.43
SPG7-215ENST00000566682 GPR119Q8TDV5 335 aa12.37□□□□□ -0.43
SPG7-215ENST00000566682 ZBTB8AQ96BR9 441 aa12.37□□□□□ -0.43
SPG7-215ENST00000566682 TREX2Q9BQ50 279 aaPredicted RBP12.37□□□□□ -0.43
SPG7-215ENST00000566682 CPPED1Q9BRF8 314 aaPredicted RBP12.37□□□□□ -0.43
SPG7-215ENST00000566682 THUMPD3Q9BV44 507 aaKnown RBP12.37□□□□□ -0.43
SPG7-215ENST00000566682 TRIM8Q9BZR9 551 aa12.37□□□□□ -0.43
SPG7-215ENST00000566682 A4GALTQ9NPC4 353 aa12.37□□□□□ -0.43
SPG7-215ENST00000566682 SLC35A3Q9Y2D2 325 aa12.37□□□□□ -0.43
SPG7-215ENST00000566682 DSPPQ9NZW4 1301 aa12.37□□□□□ -0.43
SPG7-215ENST00000566682 A0A0G2JPF8 293 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 BBIP1A8MTZ0 92 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 KDM4EB2RXH2 506 aaPredicted RBP12.36□□□□□ -0.43
SPG7-215ENST00000566682 HNRNPCL2B2RXH8 293 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 HNRNPCL3B7ZW38 293 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 HNRNPCL1O60812 293 aaKnown RBP12.36□□□□□ -0.43
SPG7-215ENST00000566682 BCAS1O75363 584 aaPredicted RBP12.36□□□□□ -0.43
SPG7-215ENST00000566682 EPPINO95925 133 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 DBIP07108 87 aaKnown RBP12.36□□□□□ -0.43
SPG7-215ENST00000566682 HNRNPCL4P0DMR1 293 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 GLI4P10075 376 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 ARAFP10398 606 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 PSMA4P25789 261 aaKnown RBP12.36□□□□□ -0.43
SPG7-215ENST00000566682 CCR4P51679 360 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 MTPNP58546 118 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 CBFBQ13951 182 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 SELPLGQ14242 412 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 CAPRIN1Q14444 709 aaKnown RBP12.36□□□□□ -0.43
SPG7-215ENST00000566682 SF3B4Q15427 424 aaKnown RBP eCLIP12.36□□□□□ -0.436e-6■□□□□ 11
SPG7-215ENST00000566682 BCL2A1Q16548 175 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 ACSF3Q4G176 576 aaPredicted RBP12.36□□□□□ -0.43
SPG7-215ENST00000566682 COQ5Q5HYK3 327 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 GCNT6Q5T4J0 391 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 XKRXQ6PP77 449 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 VRK2Q86Y07 508 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 PEX5LQ8IYB4 626 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 UBQLNLQ8IYU4 475 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 GTPBP8Q8N3Z3 284 aaPredicted RBP12.36□□□□□ -0.43
SPG7-215ENST00000566682 ZNF808Q8N4W9 903 aaPredicted RBP12.36□□□□□ -0.43
SPG7-215ENST00000566682 FAM71CQ8NEG0 241 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 TOR1AIP2Q8NFQ8 470 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 OR52P1PQ8NH57 321 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 RP9Q8TA86 221 aaKnown RBP12.36□□□□□ -0.43
SPG7-215ENST00000566682 POC1BQ8TC44 478 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 ZPLD1Q8TCW7 415 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 WDR60Q8WVS4 1066 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 RND1Q92730 232 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 ZNF524Q96C55 264 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 ARSGQ96EG1 525 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 RNF145Q96MT1 663 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 CCDC106Q9BWC9 280 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 BCL2L10Q9HD36 194 aa12.36□□□□□ -0.43
SPG7-215ENST00000566682 A1L4Q6 167 aa12.35□□□□□ -0.43
SPG7-215ENST00000566682 C7orf72A4D263 438 aa12.35□□□□□ -0.43
SPG7-215ENST00000566682 C5orf58C9J3I9 102 aa12.35□□□□□ -0.43
SPG7-215ENST00000566682 C3orf80F5H4A9 247 aa12.35□□□□□ -0.43
SPG7-215ENST00000566682 H0Y3Z8 333 aa12.35□□□□□ -0.43
SPG7-215ENST00000566682 H0YC42 278 aa12.35□□□□□ -0.43
SPG7-215ENST00000566682 MRASO14807 208 aa12.35□□□□□ -0.43
SPG7-215ENST00000566682 DNAJA2O60884 412 aa12.35□□□□□ -0.43
SPG7-215ENST00000566682 PGM3O95394 542 aa12.35□□□□□ -0.43
SPG7-215ENST00000566682 NPPAP01160 153 aa12.35□□□□□ -0.43
SPG7-215ENST00000566682 NID1P14543 1247 aa12.35□□□□□ -0.43
SPG7-215ENST00000566682 ZNF17P17021 662 aa12.35□□□□□ -0.43
SPG7-215ENST00000566682 POU3F2P20265 443 aaPredicted RBP12.35□□□□□ -0.43
SPG7-215ENST00000566682 AGAP20933 346 aa12.35□□□□□ -0.43
SPG7-215ENST00000566682 ADH6P28332 368 aa12.35□□□□□ -0.43
SPG7-215ENST00000566682 SUCLG1P53597 346 aaKnown RBP12.35□□□□□ -0.43
SPG7-215ENST00000566682 TPD52P55327 224 aaPredicted RBP12.35□□□□□ -0.43
SPG7-215ENST00000566682 CLDN15P56746 228 aa12.35□□□□□ -0.43
SPG7-215ENST00000566682 CLDN20P56880 219 aa12.35□□□□□ -0.43
SPG7-215ENST00000566682 CDK6Q00534 326 aa12.35□□□□□ -0.43
SPG7-215ENST00000566682 PLAURQ03405 335 aa12.35□□□□□ -0.43
SPG7-215ENST00000566682 ADRM1Q16186 407 aa12.35□□□□□ -0.43
SPG7-215ENST00000566682 TRMT5Q32P41 509 aaKnown RBP12.35□□□□□ -0.43
SPG7-215ENST00000566682 MRPL2Q5T653 305 aaKnown RBP12.35□□□□□ -0.43
SPG7-215ENST00000566682 PRAMEF8Q5VWM4 474 aa12.35□□□□□ -0.43
SPG7-215ENST00000566682 PRAMEF7Q5VXH5 474 aa12.35□□□□□ -0.43
SPG7-215ENST00000566682 NANOGP8Q6NSW7 305 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms