RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 NKD1Q969G9 470 aa16.21■□□□□ 0.19
HERC2-208ENST00000566635 SLC35B4Q969S0 331 aa16.21■□□□□ 0.19
HERC2-208ENST00000566635 SH3YL1Q96HL8 342 aaPredicted RBP16.21■□□□□ 0.19
HERC2-208ENST00000566635 NODALQ96S42 347 aa16.21■□□□□ 0.19
HERC2-208ENST00000566635 PRSS27Q9BQR3 290 aa16.21■□□□□ 0.19
HERC2-208ENST00000566635 GABARAPL3Q9BY60 117 aa16.21■□□□□ 0.19
HERC2-208ENST00000566635 EVA1AQ9H8M9 152 aa16.21■□□□□ 0.19
HERC2-208ENST00000566635 IL17BQ9UHF5 180 aa16.21■□□□□ 0.19
HERC2-208ENST00000566635 ASPMQ8IZT6 3477 aa16.21■□□□□ 0.19
HERC2-208ENST00000566635 A0A0B4J2E0 115 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 LOC100130705A0A1B0GUX0 176 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 A0A1B0GWA3 101 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 A0A1B0GX12 115 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 ALG1L2C9J202 215 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 ZNF264O43296 627 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 GMFGO60234 142 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 PIP5K1CO60331 668 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 FADS1O60427 444 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 NGFRP08138 427 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 CLK3P49761 638 aaKnown RBP16.21■□□□□ 0.18
HERC2-208ENST00000566635 ZNF117Q03924 483 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 Q0VFX4 171 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 KLHL17Q6TDP4 642 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 ZNF730Q6ZMV8 503 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 ZER1Q7Z7L7 766 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 MRGPREQ86SM8 312 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 APLFQ8IW19 511 aaPredicted RBP16.21■□□□□ 0.18
HERC2-208ENST00000566635 CADM2Q8N3J6 435 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 HGDQ93099 445 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 MUS81Q96NY9 551 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 RASL10BQ96S79 203 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 TBL1XR1Q9BZK7 514 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 POLR2J2Q9GZM3 115 aaKnown RBP16.21■□□□□ 0.18
HERC2-208ENST00000566635 POLR2J3Q9H1A7 115 aaKnown RBP16.21■□□□□ 0.18
HERC2-208ENST00000566635 ANKRD19PQ9H560 264 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 ZNF556Q9HAH1 456 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 TMEM27Q9HBJ8 222 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 ASCL3Q9NQ33 180 aa16.21■□□□□ 0.18
HERC2-208ENST00000566635 GTPBP1O00178 669 aaKnown RBP16.2■□□□□ 0.18
HERC2-208ENST00000566635 ADAM10O14672 748 aa16.2■□□□□ 0.18
HERC2-208ENST00000566635 ADAP00813 363 aa16.2■□□□□ 0.18
HERC2-208ENST00000566635 CDH2P19022 906 aaPredicted RBP16.2■□□□□ 0.18
HERC2-208ENST00000566635 UGT2B15P54855 530 aa16.2■□□□□ 0.18
HERC2-208ENST00000566635 TTC23Q5W5X9 447 aa16.2■□□□□ 0.18
HERC2-208ENST00000566635 KRT80Q6KB66 452 aa16.2■□□□□ 0.18
HERC2-208ENST00000566635 TMPRSS7Q7RTY8 843 aa16.2■□□□□ 0.18
HERC2-208ENST00000566635 GALNT15Q8N3T1 639 aa16.2■□□□□ 0.18
HERC2-208ENST00000566635 SLC22A8Q8TCC7 542 aa16.2■□□□□ 0.18
HERC2-208ENST00000566635 NR1H4Q96RI1 486 aaPredicted RBP16.2■□□□□ 0.18
HERC2-208ENST00000566635 GPA33Q99795 319 aa16.2■□□□□ 0.18
HERC2-208ENST00000566635 GRIP2Q9C0E4 1043 aa16.2■□□□□ 0.18
HERC2-208ENST00000566635 P4HTMQ9NXG6 502 aa16.2■□□□□ 0.18
HERC2-208ENST00000566635 MGAT4BQ9UQ53 548 aa16.2■□□□□ 0.18
HERC2-208ENST00000566635 A0A1W2PQD3 144 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 BCKDKO14874 412 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 SLC16A6O15403 523 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 NDUFB5O43674 189 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 ITGA10O75578 1167 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 GSSP48637 474 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 MYBPC1Q00872 1141 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 NPRL3Q12980 569 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 EFR3AQ14156 821 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 TGIF1Q15583 401 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 ZNF613Q6PF04 617 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 IL22RA1Q8N6P7 574 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 ACOT11Q8WXI4 607 aaPredicted RBP16.19■□□□□ 0.18
HERC2-208ENST00000566635 GATA6Q92908 595 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 SH3GL3Q99963 347 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 TRIM2Q9C040 744 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 CELSR3Q9NYQ7 3312 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 H3BNH8 94 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 ANGPTL1O95841 491 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 HPP00738 406 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 SOX3P41225 446 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 ATP1A4Q13733 1029 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 BLMHQ13867 455 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 PRICKLE2Q7Z3G6 844 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 NRMQ8IXM6 262 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 LSMEM1Q8N8F7 131 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 ZNF524Q96C55 264 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 FAM46AQ96IP4 442 aaKnown RBP16.19■□□□□ 0.18
HERC2-208ENST00000566635 DGCR6LQ9BY27 220 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 EXOSC3Q9NQT5 275 aaKnown RBP16.19■□□□□ 0.18
HERC2-208ENST00000566635 CNIH4Q9P003 139 aa16.19■□□□□ 0.18
HERC2-208ENST00000566635 CDV3Q9UKY7 258 aaKnown RBP16.19■□□□□ 0.18
HERC2-208ENST00000566635 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.18■□□□□ 0.18
HERC2-208ENST00000566635 GFRA3O60609 400 aa16.18■□□□□ 0.18
HERC2-208ENST00000566635 SOX14O95416 240 aa16.18■□□□□ 0.18
HERC2-208ENST00000566635 LYNP07948 512 aa16.18■□□□□ 0.18
HERC2-208ENST00000566635 IGFBP1P08833 259 aaPredicted RBP16.18■□□□□ 0.18
HERC2-208ENST00000566635 FBXO45P0C2W1 286 aa16.18■□□□□ 0.18
HERC2-208ENST00000566635 CHN2P52757 468 aa16.18■□□□□ 0.18
HERC2-208ENST00000566635 RAPSNQ13702 412 aa16.18■□□□□ 0.18
HERC2-208ENST00000566635 BICRALQ6AI39 1079 aa16.18■□□□□ 0.18
HERC2-208ENST00000566635 ZNF440Q8IYI8 595 aa16.18■□□□□ 0.18
HERC2-208ENST00000566635 OR10G3Q8NGC4 313 aa16.18■□□□□ 0.18
HERC2-208ENST00000566635 UCK2Q9BZX2 261 aa16.18■□□□□ 0.18
HERC2-208ENST00000566635 KPNA4O00629 521 aaPredicted RBP16.18■□□□□ 0.18
HERC2-208ENST00000566635 HCRTR2O43614 444 aa16.18■□□□□ 0.18
HERC2-208ENST00000566635 CHP2O43745 196 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms