RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 FAM234BA2RU67 622 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 H3BNH8 94 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 LINC01387J3KSC0 135 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 TNFRSF21O75509 655 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 NGFRP08138 427 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 OR12D1P0DN82 309 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 UQCRC2P22695 453 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 LCN1P31025 176 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 SFTPDP35247 375 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 ATP12AP54707 1039 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 FOXF1Q12946 379 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 POU4F3Q15319 338 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 PLPPR5Q32ZL2 321 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 FBXL19-AS1Q494R0 122 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 GLYR1Q49A26 553 aaPredicted RBP12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 METTL21CQ5VZV1 264 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 CBLN3Q6UW01 205 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 MSANTD1Q6ZTZ1 278 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 C16orf62Q7Z3J2 963 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 HMGN2P46Q86SG4 172 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 KIF18BQ86Y91 864 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 FUNDC1Q8IVP5 155 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 MISPQ8IVT2 679 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 ZNF527Q8NB42 609 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 XAGE5Q8WWM1 108 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 UCN2Q96RP3 112 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 OPN3Q9H1Y3 402 aaPredicted RBP12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 FOXD3Q9UJU5 478 aaPredicted RBP12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 PACSIN3Q9UKS6 424 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 AP4B1Q9Y6B7 739 aa12.26□□□□□ -0.45
VPS9D1-204ENST00000565023 A0A087WZY1 265 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 A0A1W2PQD3 144 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 TNFSF11O14788 317 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 CXCL13O43927 109 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 TNFSF13O75888 250 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 AQP8O94778 261 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 SOX30O94993 753 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 C1QCP02747 245 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 IL11P20809 199 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 CHI3L1P36222 383 aaPredicted RBP12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 SQLEQ14534 574 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 TOMM34Q15785 309 aaPredicted RBP12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 PDZK1Q5T2W1 519 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 SAXO2Q658L1 398 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 OR2A2Q6IF42 318 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 BLOC1S3Q6QNY0 202 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 BTLAQ7Z6A9 289 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 GGNQ86UU5 652 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 GTPBP8Q8N3Z3 284 aaPredicted RBP12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 OR10D3Q8NH80 312 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 POC1BQ8TC44 478 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 MIPOL1Q8TD10 442 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 NEURL3Q96EH8 262 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 PANX1Q96RD7 426 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 SDF2Q99470 211 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 SLC35A5Q9BS91 424 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 INPP5KQ9BT40 448 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 TMEM120AQ9BXJ8 343 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 HOXD1Q9GZZ0 328 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 ZNF385DQ9H6B1 395 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 JKAMPQ9P055 326 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 STOML1Q9UBI4 398 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 MKLN1Q9UL63 735 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 TRIM33Q9UPN9 1127 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 DTNAQ9Y4J8 743 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 FBN3Q75N90 2809 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 AKAP6Q13023 2319 aa12.25□□□□□ -0.45
VPS9D1-204ENST00000565023 CENPVL1A0A0U1RR11 272 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 CCDC154A6NI56 674 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 A6NNC1 897 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 CTAG2O75638 210 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 SYNGR4O95473 234 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 PLGP00747 810 aaPredicted RBP12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 GSNP06396 782 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 ZNF17P17021 662 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 ME2P23368 584 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 SHC1P29353 583 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 PEX19P40855 299 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 CDKN2CP42773 168 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 SLC6A8P48029 635 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 KCNJ5P48544 419 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 P2RX1P51575 399 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 TMEM44Q2T9K0 475 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 TIGD2Q4W5G0 525 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 KLHL26Q53HC5 615 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 DCHS2Q6V1P9 2916 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 DNAJC14Q6Y2X3 702 aaPredicted RBP12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 MED13LQ71F56 2210 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 METTL25Q8N6Q8 603 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 FBXO27Q8NI29 283 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 FAM222BQ8WU58 562 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 VPS33AQ96AX1 596 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 ZBTB8AQ96BR9 441 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 STARD4Q96DR4 205 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 CLEC4MQ9H2X3 399 aaPredicted RBP12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 PIGMQ9H3S5 423 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 LIME1Q9H400 295 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 RABEP2Q9H5N1 569 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms