RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 DNAJC11Q9NVH1 559 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 FKBP14Q9NWM8 211 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 HPF1Q9NWY4 346 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 AKAP7Q9P0M2 348 aaPredicted RBP3.25□□□□□ -1.89
CHD9-212ENST00000564641 UVRAGQ9P2Y5 699 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 RSL24D1Q9UHA3 163 aaKnown RBP3.25□□□□□ -1.89
CHD9-212ENST00000564641 GNPTGQ9UJJ9 305 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 SNX24Q9Y343 169 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 MAD1L1Q9Y6D9 718 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 STYXL1Q9Y6J8 313 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 CHD9Q3L8U1 2897 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 XIRP2A4UGR9 3374 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 ASTN1O14525 1302 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 COL4A6Q14031 1691 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 TRBV2A0A0J9YWF9 115 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 GOLGA8QA0A0J9YX86 632 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 GOLGA8OA6NCC3 632 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 BTNL10A8MVZ5 291 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 C5orf67F2Z3F1 127 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 GOLGA8NF8WBI6 632 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 GOLGA8RI6L899 631 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 AP3B1O00203 1094 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 AQP9O43315 295 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 RIPK2O43353 540 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 DENRO43583 198 aaKnown RBP3.24□□□□□ -1.89
CHD9-212ENST00000564641 VEGFDO43915 354 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 PRPSAP2O60256 369 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 GMNNO75496 209 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 BCAS2O75934 225 aaPredicted RBP3.24□□□□□ -1.89
CHD9-212ENST00000564641 TNFAIP8O95379 198 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 CRYZL1O95825 349 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 HOXB8P17481 243 aaPredicted RBP3.24□□□□□ -1.89
CHD9-212ENST00000564641 LBPP18428 481 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 CCNE1P24864 410 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 MAPK3P27361 379 aaPredicted RBP3.24□□□□□ -1.89
CHD9-212ENST00000564641 FOXN2P32314 431 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 ACADSBP45954 432 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 NPBWR1P48145 328 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 KRT6CP48668 564 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 CDK9P50750 372 aaKnown RBP3.24□□□□□ -1.89
CHD9-212ENST00000564641 IST1P53990 364 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 CTAG1AP78358 180 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 FKBP3Q00688 224 aaKnown RBP3.24□□□□□ -1.89
CHD9-212ENST00000564641 GPM6BQ13491 265 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 SPCS2Q15005 226 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 KCNJ8Q15842 424 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 QRICH1Q2TAL8 776 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 TRMT5Q32P41 509 aaKnown RBP3.24□□□□□ -1.89
CHD9-212ENST00000564641 ZNF829Q3KNS6 432 aaPredicted RBP3.24□□□□□ -1.89
CHD9-212ENST00000564641 EPC2Q52LR7 807 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 TNFAIP8L3Q5GJ75 292 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 FGD3Q5JSP0 725 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 LRRC38Q5VT99 294 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 RNLSQ5VYX0 342 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 DUPD1Q68J44 220 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 CGB2Q6NT52 195 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 RWDD4Q6NW29 188 aaKnown RBP3.24□□□□□ -1.89
CHD9-212ENST00000564641 DHRS4L2Q6PKH6 230 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 UGT2A3Q6UWM9 527 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 IL17RELQ6ZVW7 336 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 RFPL4BQ6ZWI9 263 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 LPCAT2Q7L5N7 544 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 TIPARPQ7Z3E1 657 aaKnown RBP3.24□□□□□ -1.89
CHD9-212ENST00000564641 PRSS42Q7Z5A4 293 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 ITIH5Q86UX2 942 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 ZNF410Q86VK4 478 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 MEX3DQ86XN8 651 aaKnown RBP3.24□□□□□ -1.89
CHD9-212ENST00000564641 MMAAQ8IVH4 418 aaKnown RBP3.24□□□□□ -1.89
CHD9-212ENST00000564641 SFRP1Q8N474 314 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 CSGALNACT2Q8N6G5 542 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 CSNK1G2-AS1Q8NCQ2 148 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 TET1Q8NFU7 2136 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 OR52B6Q8NGF0 335 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 RHOXF1Q8NHV9 184 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 GIMAP1Q8WWP7 306 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 SLC13A3Q8WWT9 602 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 PLEKHA8Q96JA3 519 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 BTBD9Q96Q07 612 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 COQ7Q99807 217 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 CTRCQ99895 268 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 CCDC3Q9BQI4 270 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 OSBPL8Q9BZF1 889 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 ADNPQ9H2P0 1102 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 SNX25Q9H3E2 840 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 ACTL8Q9H568 366 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 S100A14Q9HCY8 104 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 ABCB10Q9NRK6 738 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 GPR173Q9NS66 373 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 TNFRSF19Q9NS68 423 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 NLGN3Q9NZ94 848 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 HACD3Q9P035 362 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 PACSIN2Q9UNF0 486 aaPredicted RBP3.24□□□□□ -1.89
CHD9-212ENST00000564641 VSIG4Q9Y279 399 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 IFT52Q9Y366 437 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 RBMX2Q9Y388 322 aaKnown RBP3.24□□□□□ -1.89
CHD9-212ENST00000564641 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.24□□□□□ -1.89
CHD9-212ENST00000564641 KIF25-AS1Q9Y6Z4 181 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 ZDBF2Q9HCK1 2354 aa3.24□□□□□ -1.89
CHD9-212ENST00000564641 ADGRA3Q8IWK6 1321 aa3.23□□□□□ -1.89
CHD9-212ENST00000564641 CACNA1HO95180 2353 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms