RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 NDUFAF1Q9Y375 327 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 DOPEY1Q5JWR5 2465 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 ARHGAP21Q5T5U3 1957 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 ASH1LQ9NR48 2969 aaKnown RBP9.13□□□□□ -0.95
HERC1-212ENST00000561348 A0A087WZY1 265 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 A0A096LPI6 279 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 LOC100653049A0A140TA62 436 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 PRAMEF27A3QJZ7 478 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 CYSRT1A8MQ03 144 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 EVPLLA8MZ36 301 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 DVL2O14641 736 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 TNFSF11O14788 317 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 ATP8B1O43520 1251 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 KIAA0513O60268 411 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 KRT34O76011 436 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 TOXO94900 526 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 SYNGR4O95473 234 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 PLGP00747 810 aaPredicted RBP9.13□□□□□ -0.95
HERC1-212ENST00000561348 TMIGD3P0DMS9 266 aaPredicted RBP9.13□□□□□ -0.95
HERC1-212ENST00000561348 TFPIP10646 304 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 ZNF708P17019 499 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 IL11P20809 199 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 CPA2P48052 419 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 ATP4BP51164 291 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 GYS2P54840 703 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 KCNJ10P78508 379 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 NFYCQ13952 458 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 GNA13Q14344 377 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 PON3Q15166 354 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 QPRTQ15274 297 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 RIPPLY2Q5TAB7 128 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 NSUN5P2Q63ZY6 315 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 HEPHL1Q6MZM0 1159 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 SEM1Q6ZVN7 128 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 DHDDSQ86SQ9 333 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 LUZP2Q86TE4 346 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 LSRQ86X29 649 aaPredicted RBP9.13□□□□□ -0.95
HERC1-212ENST00000561348 VRK2Q86Y07 508 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 PEX5LQ8IYB4 626 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 LILRA2Q8N149 483 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 ZNF454Q8N9F8 522 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 NAXEQ8NCW5 288 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 OR5W2Q8NH69 310 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 LILRB4Q8NHJ6 448 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 ZPLD1Q8TCW7 415 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 WDR60Q8WVS4 1066 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 CNOT9Q92600 299 aaKnown RBP9.13□□□□□ -0.95
HERC1-212ENST00000561348 MARVELD3Q96A59 401 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 ZBTB8AQ96BR9 441 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 TMEM19Q96HH6 336 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 TRNT1Q96Q11 434 aaKnown RBP9.13□□□□□ -0.95
HERC1-212ENST00000561348 SIKE1Q9BRV8 207 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 NMUR2Q9GZQ4 415 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 RAD21L1Q9H4I0 556 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 PIF1Q9H611 641 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 RUBCNLQ9H714 662 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 MTHFD2LQ9H903 347 aaPredicted RBP9.13□□□□□ -0.95
HERC1-212ENST00000561348 LEF1Q9UJU2 399 aaPredicted RBP9.13□□□□□ -0.95
HERC1-212ENST00000561348 CLEC4AQ9UMR7 237 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 MRPS18CQ9Y3D5 142 aaKnown RBP9.13□□□□□ -0.95
HERC1-212ENST00000561348 L3MBTL1Q9Y468 752 aa9.13□□□□□ -0.95
HERC1-212ENST00000561348 KLF2Q9Y5W3 355 aaPredicted RBP9.13□□□□□ -0.95
HERC1-212ENST00000561348 NCOA6Q14686 2063 aaPredicted RBP9.12□□□□□ -0.95
HERC1-212ENST00000561348 CACNA1CQ13936 2221 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 IGLV3-32A0A0A0MS00 114 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 A0A1W2PP18 115 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 CD8B2A6NJW9 211 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 NPIPB9F8W1W9 429 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 CXCL13O43927 109 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 EIF4E2O60573 245 aaKnown RBP9.12□□□□□ -0.95
HERC1-212ENST00000561348 BCAS1O75363 584 aaPredicted RBP9.12□□□□□ -0.95
HERC1-212ENST00000561348 TGM6O95932 706 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 LINGO3P0C6S8 592 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 GKN3PP0CG01 181 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 ZCCHC18P0CG32 403 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 PGCP20142 388 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 AGAP20933 346 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 AQP1P29972 269 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 SLC7A1P30825 629 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 CPOXP36551 454 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 IDH2P48735 452 aaKnown RBP9.12□□□□□ -0.95
HERC1-212ENST00000561348 CRISP3P54108 245 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 MERTKQ12866 999 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 FOXF2Q12947 444 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 MYBPHQ13203 477 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 CAPRIN1Q14444 709 aaKnown RBP9.12□□□□□ -0.95
HERC1-212ENST00000561348 FGFBP1Q14512 234 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 RGNQ15493 299 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 ZNF141Q15928 474 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 CYP51A1Q16850 503 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 TMEM176BQ3YBM2 270 aaPredicted RBP9.12□□□□□ -0.95
HERC1-212ENST00000561348 PDSS1Q5T2R2 415 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 GCNT6Q5T4J0 391 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 HBMQ6B0K9 141 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 CGB2Q6NT52 195 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 LRRC74BQ6ZQY2 392 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 MCEMP1Q8IX19 187 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 GTPBP8Q8N3Z3 284 aaPredicted RBP9.12□□□□□ -0.95
HERC1-212ENST00000561348 OR52P1PQ8NH57 321 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 NFKBIDQ8NI38 313 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms