RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 VAPAQ9P0L0 249 aa17.97■□□□□ 0.47
TSPAN3-210ENST00000561277 NBPF19A0A087WUL8 3843 aa17.97■□□□□ 0.47
TSPAN3-210ENST00000561277 HSPB2A8KAH6 182 aa17.96■□□□□ 0.47
TSPAN3-210ENST00000561277 C19orf84I3L1E1 186 aa17.96■□□□□ 0.47
TSPAN3-210ENST00000561277 BCAS1O75363 584 aaPredicted RBP17.96■□□□□ 0.47
TSPAN3-210ENST00000561277 LINGO3P0C6S8 592 aa17.96■□□□□ 0.47
TSPAN3-210ENST00000561277 TIMP3P35625 211 aa17.96■□□□□ 0.47
TSPAN3-210ENST00000561277 SKP2Q13309 424 aa17.96■□□□□ 0.47
TSPAN3-210ENST00000561277 RGNQ15493 299 aa17.96■□□□□ 0.47
TSPAN3-210ENST00000561277 HSPB2Q16082 182 aa17.96■□□□□ 0.47
TSPAN3-210ENST00000561277 GRAMD2AQ8IUY3 354 aa17.96■□□□□ 0.47
TSPAN3-210ENST00000561277 LIX1LQ8IVB5 337 aa17.96■□□□□ 0.47
TSPAN3-210ENST00000561277 OR5W2Q8NH69 310 aa17.96■□□□□ 0.47
TSPAN3-210ENST00000561277 POC1BQ8TC44 478 aa17.96■□□□□ 0.47
TSPAN3-210ENST00000561277 GPR119Q8TDV5 335 aa17.96■□□□□ 0.47
TSPAN3-210ENST00000561277 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.96■□□□□ 0.47
TSPAN3-210ENST00000561277 LEF1Q9UJU2 399 aaPredicted RBP17.96■□□□□ 0.47
TSPAN3-210ENST00000561277 AP4B1Q9Y6B7 739 aa17.96■□□□□ 0.47
TSPAN3-210ENST00000561277 C7orf72A4D263 438 aa17.96■□□□□ 0.46
TSPAN3-210ENST00000561277 MBD3L4A6NDZ8 208 aaPredicted RBP17.96■□□□□ 0.46
TSPAN3-210ENST00000561277 MBD3L3A6NE82 208 aaPredicted RBP17.96■□□□□ 0.46
TSPAN3-210ENST00000561277 MBD3L5A6NJ08 208 aaPredicted RBP17.96■□□□□ 0.46
TSPAN3-210ENST00000561277 ANGPT2O15123 496 aa17.96■□□□□ 0.46
TSPAN3-210ENST00000561277 OPN1LWP04000 364 aa17.96■□□□□ 0.46
TSPAN3-210ENST00000561277 NUDT7P0C024 238 aa17.96■□□□□ 0.46
TSPAN3-210ENST00000561277 CEACAM8P31997 349 aaPredicted RBP17.96■□□□□ 0.46
TSPAN3-210ENST00000561277 CLDN15P56746 228 aa17.96■□□□□ 0.46
TSPAN3-210ENST00000561277 CBFBQ13951 182 aa17.96■□□□□ 0.46
TSPAN3-210ENST00000561277 MAPK11Q15759 364 aa17.96■□□□□ 0.46
TSPAN3-210ENST00000561277 RPS26P11Q5JNZ5 115 aaPredicted RBP17.96■□□□□ 0.46
TSPAN3-210ENST00000561277 MBD3L2Q8NHZ7 208 aaPredicted RBP17.96■□□□□ 0.46
TSPAN3-210ENST00000561277 SLC38A5Q8WUX1 472 aa17.96■□□□□ 0.46
TSPAN3-210ENST00000561277 TMEM19Q96HH6 336 aa17.96■□□□□ 0.46
TSPAN3-210ENST00000561277 THUMPD3Q9BV44 507 aaKnown RBP17.96■□□□□ 0.46
TSPAN3-210ENST00000561277 LAT2Q9GZY6 243 aa17.96■□□□□ 0.46
TSPAN3-210ENST00000561277 RAD21L1Q9H4I0 556 aa17.96■□□□□ 0.46
TSPAN3-210ENST00000561277 CHST11Q9NPF2 352 aa17.96■□□□□ 0.46
TSPAN3-210ENST00000561277 SLC35A3Q9Y2D2 325 aa17.96■□□□□ 0.46
TSPAN3-210ENST00000561277 NDUFAF1Q9Y375 327 aa17.96■□□□□ 0.46
TSPAN3-210ENST00000561277 TMEM247A6NEH6 219 aa17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 AGAP5A6NIR3 686 aa17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 EIF1AYO14602 144 aaKnown RBP17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 PRKCAP17252 672 aa17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 IL11P20809 199 aa17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 BMP5P22003 454 aa17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 ME2P23368 584 aa17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 PSMA4P25789 261 aaKnown RBP17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 PGM1P36871 562 aa17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 EIF1P41567 113 aaKnown RBP17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 AGFG1P52594 562 aaKnown RBP17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 CRISP3P54108 245 aa17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 QPRTQ15274 297 aa17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 ADGRE4PQ86SQ3 457 aa17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 GGNQ86UU5 652 aa17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 FBXO27Q8NI29 283 aa17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 OIT3Q8WWZ8 545 aa17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 MAL2Q969L2 176 aa17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 ZNF524Q96C55 264 aa17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 ZNF317Q96PQ6 595 aaPredicted RBP17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 PINK1Q9BXM7 581 aa17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 MTHFD2LQ9H903 347 aaPredicted RBP17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 KCNJ16Q9NPI9 418 aa17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 KLHL14Q9P2G3 628 aa17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 CLCF1Q9UBD9 225 aa17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 STOML1Q9UBI4 398 aa17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 GPC6Q9Y625 555 aaPredicted RBP17.95■□□□□ 0.46
TSPAN3-210ENST00000561277 SNRPB2P08579 225 aaKnown RBP17.94■□□□□ 0.46
TSPAN3-210ENST00000561277 TFPTP0C1Z6 253 aa17.94■□□□□ 0.46
TSPAN3-210ENST00000561277 IL7RP16871 459 aa17.94■□□□□ 0.46
TSPAN3-210ENST00000561277 ZNF136P52737 540 aa17.94■□□□□ 0.46
TSPAN3-210ENST00000561277 EEFSECP57772 596 aaKnown RBP17.94■□□□□ 0.46
TSPAN3-210ENST00000561277 KCNJ10P78508 379 aa17.94■□□□□ 0.46
TSPAN3-210ENST00000561277 FADDQ13158 208 aa17.94■□□□□ 0.46
TSPAN3-210ENST00000561277 AP1ARQ63HQ0 302 aa17.94■□□□□ 0.46
TSPAN3-210ENST00000561277 PPP4R4Q6NUP7 873 aa17.94■□□□□ 0.46
TSPAN3-210ENST00000561277 P4HA3Q7Z4N8 544 aa17.94■□□□□ 0.46
TSPAN3-210ENST00000561277 DHDDSQ86SQ9 333 aa17.94■□□□□ 0.46
TSPAN3-210ENST00000561277 RETREG3Q86VR2 466 aa17.94■□□□□ 0.46
TSPAN3-210ENST00000561277 GCNT2Q8N0V5 402 aa17.94■□□□□ 0.46
TSPAN3-210ENST00000561277 WDR60Q8WVS4 1066 aa17.94■□□□□ 0.46
TSPAN3-210ENST00000561277 WNT2BQ93097 391 aa17.94■□□□□ 0.46
TSPAN3-210ENST00000561277 ZNF845Q96IR2 970 aaPredicted RBP17.94■□□□□ 0.46
TSPAN3-210ENST00000561277 THUMPD1Q9NXG2 353 aaKnown RBP17.94■□□□□ 0.46
TSPAN3-210ENST00000561277 CALML5Q9NZT1 146 aa17.94■□□□□ 0.46
TSPAN3-210ENST00000561277 TRBV5-3A0A0A0MS03 114 aa17.93■□□□□ 0.46
TSPAN3-210ENST00000561277 CYSRT1A8MQ03 144 aa17.93■□□□□ 0.46
TSPAN3-210ENST00000561277 TGM6O95932 706 aa17.93■□□□□ 0.46
TSPAN3-210ENST00000561277 TMIGD3P0DMS9 266 aaPredicted RBP17.93■□□□□ 0.46
TSPAN3-210ENST00000561277 PPIBP23284 216 aaKnown RBP17.93■□□□□ 0.46
TSPAN3-210ENST00000561277 RYKP34925 604 aa17.93■□□□□ 0.46
TSPAN3-210ENST00000561277 EIF1AXP47813 144 aaKnown RBP17.93■□□□□ 0.46
TSPAN3-210ENST00000561277 RAC1P63000 192 aa17.93■□□□□ 0.46
TSPAN3-210ENST00000561277 PLAURQ03405 335 aa17.93■□□□□ 0.46
TSPAN3-210ENST00000561277 SGCBQ16585 318 aa17.93■□□□□ 0.46
TSPAN3-210ENST00000561277 PEX5LQ8IYB4 626 aa17.93■□□□□ 0.46
TSPAN3-210ENST00000561277 C10orf111Q8N326 155 aa17.93■□□□□ 0.46
TSPAN3-210ENST00000561277 FAM71CQ8NEG0 241 aa17.93■□□□□ 0.46
TSPAN3-210ENST00000561277 INTS12Q96CB8 462 aaKnown RBP17.93■□□□□ 0.46
TSPAN3-210ENST00000561277 TM9SF2Q99805 663 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms