RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 RPS6KB2Q9UBS0 482 aa15.73■□□□□ 0.11
HDDC3-206ENST00000561036 PADI1Q9ULC6 663 aa15.73■□□□□ 0.11
HDDC3-206ENST00000561036 PTRH2Q9Y3E5 179 aaKnown RBP15.73■□□□□ 0.11
HDDC3-206ENST00000561036 USP34Q70CQ2 3546 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 TRBV11-1A0A0K0K1C0 115 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 A0A1W2PQ72 361 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 SH3D21A4FU49 640 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 HTR3EA5X5Y0 456 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 ALG1L2C9J202 215 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 GTPBP1O00178 669 aaKnown RBP15.72■□□□□ 0.11
HDDC3-206ENST00000561036 ZNF264O43296 627 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 PRKNO60260 465 aaPredicted RBP15.72■□□□□ 0.11
HDDC3-206ENST00000561036 EIF4E2O60573 245 aaKnown RBP15.72■□□□□ 0.11
HDDC3-206ENST00000561036 ICOSLGO75144 302 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 PPM1BO75688 479 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 KLF7O75840 302 aaPredicted RBP15.72■□□□□ 0.11
HDDC3-206ENST00000561036 DLGAP3O95886 979 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 RAB40ALP0C0E4 278 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 ITIH1P19827 911 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 SLC6A8P48029 635 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 RNF144AP50876 292 aaPredicted RBP15.72■□□□□ 0.11
HDDC3-206ENST00000561036 CTBP2P56545 445 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 COPZ1P61923 177 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 TCF15Q12870 199 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 SKP2Q13309 424 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 C6orf15Q6UXA7 325 aaPredicted RBP15.72■□□□□ 0.11
HDDC3-206ENST00000561036 LINC00114Q6XXX2 140 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 CDK20Q8IZL9 346 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 POGLUT1Q8NBL1 392 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 TEX47Q8TBZ9 253 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 PHOSPHO1Q8TCT1 267 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 APH1BQ8WW43 257 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 OSTF1Q92882 214 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 FAM46AQ96IP4 442 aaKnown RBP15.72■□□□□ 0.11
HDDC3-206ENST00000561036 ZNF426Q9BUY5 554 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 PARD6AQ9NPB6 346 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 RASSF1Q9NS23 344 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 ZNF226Q9NYT6 803 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 MED31Q9Y3C7 131 aa15.72■□□□□ 0.11
HDDC3-206ENST00000561036 PLD2O14939 933 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 SOX14O95416 240 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 UMODP07911 640 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 LINGO3P0C6S8 592 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 JUNBP17275 347 aaPredicted RBP15.71■□□□□ 0.11
HDDC3-206ENST00000561036 FMO3P31513 532 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 FOLR3P41439 243 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 GIPRP48546 466 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 SMSP52788 366 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 LSM11P83369 360 aaKnown RBP eCLIP15.71■□□□□ 0.11
HDDC3-206ENST00000561036 CDK5Q00535 292 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 PCOLCEQ15113 449 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 EXT1Q16394 746 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 NADK2Q4G0N4 442 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 ALG10BQ5I7T1 473 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 WBP2NLQ6ICG8 309 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 FAM199XQ6PEV8 388 aaPredicted RBP15.71■□□□□ 0.11
HDDC3-206ENST00000561036 BORAQ6PGQ7 559 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 CASP12Q6UXS9 341 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 PTCHD4Q6ZW05 846 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 TMPRSS11FQ6ZWK6 438 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 MRGPREQ86SM8 312 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 MISPQ8IVT2 679 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 PRR22Q8IZ63 422 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 NLGN4XQ8N0W4 816 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 UBE2FQ969M7 185 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 Q96MT0 163 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 NODALQ96S42 347 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 TEX12Q9BXU0 123 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 PRRG3Q9BZD7 231 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 SPRY4Q9C004 299 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 FAM117AQ9C073 453 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 B3GNT4Q9C0J1 378 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 TOR4AQ9NXH8 423 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 PISDQ9UG56 409 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 SNX5Q9Y5X3 404 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 NPFFR2Q9Y5X5 522 aa15.71■□□□□ 0.11
HDDC3-206ENST00000561036 CDC14CA4D256 554 aa15.7■□□□□ 0.1
HDDC3-206ENST00000561036 FAM20BO75063 409 aa15.7■□□□□ 0.1
HDDC3-206ENST00000561036 ADAM11O75078 769 aa15.7■□□□□ 0.1
HDDC3-206ENST00000561036 TGM1P22735 817 aa15.7■□□□□ 0.1
HDDC3-206ENST00000561036 TTKP33981 857 aa15.7■□□□□ 0.1
HDDC3-206ENST00000561036 SLC35A2P78381 396 aa15.7■□□□□ 0.1
HDDC3-206ENST00000561036 GINS1Q14691 196 aa15.7■□□□□ 0.1
HDDC3-206ENST00000561036 TRIP6Q15654 476 aaKnown RBP15.7■□□□□ 0.1
HDDC3-206ENST00000561036 CD226Q15762 336 aa15.7■□□□□ 0.1
HDDC3-206ENST00000561036 SLC25A30Q5SVS4 291 aa15.7■□□□□ 0.1
HDDC3-206ENST00000561036 TMEM164Q5U3C3 297 aa15.7■□□□□ 0.1
HDDC3-206ENST00000561036 TMEM236Q5W0B7 351 aa15.7■□□□□ 0.1
HDDC3-206ENST00000561036 RPL13AP3Q6NVV1 102 aa15.7■□□□□ 0.1
HDDC3-206ENST00000561036 KIRREL2Q6UWL6 708 aa15.7■□□□□ 0.1
HDDC3-206ENST00000561036 APOOLQ6UXV4 268 aa15.7■□□□□ 0.1
HDDC3-206ENST00000561036 WDR88Q6ZMY6 472 aa15.7■□□□□ 0.1
HDDC3-206ENST00000561036 SATL1Q86VE3 508 aa15.7■□□□□ 0.1
HDDC3-206ENST00000561036 KIF18BQ86Y91 864 aa15.7■□□□□ 0.1
HDDC3-206ENST00000561036 SLC15A4Q8N697 577 aa15.7■□□□□ 0.1
HDDC3-206ENST00000561036 PRSS33Q8NF86 280 aa15.7■□□□□ 0.1
HDDC3-206ENST00000561036 OR8J1Q8NGP2 316 aa15.7■□□□□ 0.1
HDDC3-206ENST00000561036 GRHL3Q8TE85 626 aa15.7■□□□□ 0.1
HDDC3-206ENST00000561036 TUBA1CQ9BQE3 449 aa15.7■□□□□ 0.1
HDDC3-206ENST00000561036 TBL1XR1Q9BZK7 514 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms