RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 ZNF16P17020 682 aaPredicted RBP16.36■□□□□ 0.21
TPM1-226ENST00000560959 HNF1AP20823 631 aa16.36■□□□□ 0.21
TPM1-226ENST00000560959 IMPDH1P20839 514 aa16.36■□□□□ 0.21
TPM1-226ENST00000560959 PTNP21246 168 aa16.36■□□□□ 0.21
TPM1-226ENST00000560959 ENPP1P22413 925 aa16.36■□□□□ 0.21
TPM1-226ENST00000560959 IGHV1-2P23083 117 aa16.36■□□□□ 0.21
TPM1-226ENST00000560959 PRIM2P49643 509 aa16.36■□□□□ 0.21
TPM1-226ENST00000560959 SPDYAQ5MJ70 313 aa16.36■□□□□ 0.21
TPM1-226ENST00000560959 FAM120AOSQ5T036 256 aa16.36■□□□□ 0.21
TPM1-226ENST00000560959 KLHL17Q6TDP4 642 aa16.36■□□□□ 0.21
TPM1-226ENST00000560959 RELL1Q8IUW5 271 aa16.36■□□□□ 0.21
TPM1-226ENST00000560959 DEPDC4Q8N2C3 294 aa16.36■□□□□ 0.21
TPM1-226ENST00000560959 ZFP90Q8TF47 636 aa16.36■□□□□ 0.21
TPM1-226ENST00000560959 GIMAP5Q96F15 307 aa16.36■□□□□ 0.21
TPM1-226ENST00000560959 ZNF764Q96H86 408 aaPredicted RBP16.36■□□□□ 0.21
TPM1-226ENST00000560959 KLHDC3Q9BQ90 382 aa16.36■□□□□ 0.21
TPM1-226ENST00000560959 CXorf36Q9H7Y0 433 aa16.36■□□□□ 0.21
TPM1-226ENST00000560959 MANSC1Q9H8J5 431 aa16.36■□□□□ 0.21
TPM1-226ENST00000560959 COQ10BQ9H8M1 238 aa16.36■□□□□ 0.21
TPM1-226ENST00000560959 EQTNQ9NQ60 294 aa16.36■□□□□ 0.21
TPM1-226ENST00000560959 PRSS50Q9UI38 385 aa16.36■□□□□ 0.21
TPM1-226ENST00000560959 CYTIPO60759 359 aa16.35■□□□□ 0.21
TPM1-226ENST00000560959 SUMO3P55854 103 aaPredicted RBP16.35■□□□□ 0.21
TPM1-226ENST00000560959 RUNX1T1Q06455 604 aa16.35■□□□□ 0.21
TPM1-226ENST00000560959 FOXF1Q12946 379 aa16.35■□□□□ 0.21
TPM1-226ENST00000560959 LCP2Q13094 533 aa16.35■□□□□ 0.21
TPM1-226ENST00000560959 CD226Q15762 336 aa16.35■□□□□ 0.21
TPM1-226ENST00000560959 SLC22A25Q6T423 547 aa16.35■□□□□ 0.21
TPM1-226ENST00000560959 ZNF551Q7Z340 670 aaPredicted RBP16.35■□□□□ 0.21
TPM1-226ENST00000560959 ZAR1Q86SH2 424 aa16.35■□□□□ 0.21
TPM1-226ENST00000560959 ZNF433Q8N7K0 673 aaPredicted RBP16.35■□□□□ 0.21
TPM1-226ENST00000560959 CDC26Q8NHZ8 85 aa16.35■□□□□ 0.21
TPM1-226ENST00000560959 FBXO27Q8NI29 283 aa16.35■□□□□ 0.21
TPM1-226ENST00000560959 METTL2AQ96IZ6 378 aaKnown RBP16.35■□□□□ 0.21
TPM1-226ENST00000560959 TMEM237Q96Q45 408 aa16.35■□□□□ 0.21
TPM1-226ENST00000560959 ZNF180Q9UJW8 692 aa16.35■□□□□ 0.21
TPM1-226ENST00000560959 POU2F3Q9UKI9 436 aa16.35■□□□□ 0.21
TPM1-226ENST00000560959 TIMM22Q9Y584 194 aa16.35■□□□□ 0.21
TPM1-226ENST00000560959 VWC2LB2RUY7 222 aa16.34■□□□□ 0.21
TPM1-226ENST00000560959 NDUFS8O00217 210 aa16.34■□□□□ 0.21
TPM1-226ENST00000560959 CD40P25942 277 aa16.34■□□□□ 0.21
TPM1-226ENST00000560959 FABP6P51161 128 aa16.34■□□□□ 0.21
TPM1-226ENST00000560959 P2RX1P51575 399 aa16.34■□□□□ 0.21
TPM1-226ENST00000560959 CHRNB3Q05901 458 aa16.34■□□□□ 0.21
TPM1-226ENST00000560959 RASGEF1BQ0VAM2 473 aa16.34■□□□□ 0.21
TPM1-226ENST00000560959 EXOSC6Q5RKV6 272 aaKnown RBP16.34■□□□□ 0.21
TPM1-226ENST00000560959 TEX35Q5T0J7 233 aa16.34■□□□□ 0.21
TPM1-226ENST00000560959 TRIM46Q7Z4K8 759 aa16.34■□□□□ 0.21
TPM1-226ENST00000560959 SLC22A9Q8IVM8 553 aa16.34■□□□□ 0.21
TPM1-226ENST00000560959 SLC16A11Q8NCK7 471 aa16.34■□□□□ 0.21
TPM1-226ENST00000560959 NUP43Q8NFH3 380 aa16.34■□□□□ 0.21
TPM1-226ENST00000560959 ZNF75CPQ92670 426 aaPredicted RBP16.34■□□□□ 0.21
TPM1-226ENST00000560959 MRGPRX4Q96LA9 322 aa16.34■□□□□ 0.21
TPM1-226ENST00000560959 NINJ2Q9NZG7 142 aa16.34■□□□□ 0.21
TPM1-226ENST00000560959 ICAM5Q9UMF0 924 aa16.34■□□□□ 0.21
TPM1-226ENST00000560959 PMF1-BGLAPU3KQ54 211 aa16.34■□□□□ 0.21
TPM1-226ENST00000560959 LOC100289279A0A1B0GTE1 492 aa16.33■□□□□ 0.2
TPM1-226ENST00000560959 ACP2P11117 423 aa16.33■□□□□ 0.2
TPM1-226ENST00000560959 ATP5F1P24539 256 aaPredicted RBP16.33■□□□□ 0.2
TPM1-226ENST00000560959 GPC1P35052 558 aa16.33■□□□□ 0.2
TPM1-226ENST00000560959 PRKAG1P54619 331 aa16.33■□□□□ 0.2
TPM1-226ENST00000560959 ZNF117Q03924 483 aa16.33■□□□□ 0.2
TPM1-226ENST00000560959 C2orf54Q08AI8 447 aa16.33■□□□□ 0.2
TPM1-226ENST00000560959 HSPB3Q12988 150 aa16.33■□□□□ 0.2
TPM1-226ENST00000560959 SELENBP1Q13228 472 aa16.33■□□□□ 0.2
TPM1-226ENST00000560959 SLC25A53Q5H9E4 307 aa16.33■□□□□ 0.2
TPM1-226ENST00000560959 NOXRED1Q6NXP6 359 aa16.33■□□□□ 0.2
TPM1-226ENST00000560959 GALNT5Q7Z7M9 940 aa16.33■□□□□ 0.2
TPM1-226ENST00000560959 LCA5Q86VQ0 697 aa16.33■□□□□ 0.2
TPM1-226ENST00000560959 RFLNBQ8N5W9 214 aa16.33■□□□□ 0.2
TPM1-226ENST00000560959 OR2W6PQ8NHA6 318 aa16.33■□□□□ 0.2
TPM1-226ENST00000560959 L3HYPDHQ96EM0 354 aa16.33■□□□□ 0.2
TPM1-226ENST00000560959 MS4A4EQ96PG1 132 aa16.33■□□□□ 0.2
TPM1-226ENST00000560959 PAFAH2Q99487 392 aa16.33■□□□□ 0.2
TPM1-226ENST00000560959 INPP5KQ9BT40 448 aa16.33■□□□□ 0.2
TPM1-226ENST00000560959 HOXD1Q9GZZ0 328 aa16.33■□□□□ 0.2
TPM1-226ENST00000560959 ZDHHC18Q9NUE0 388 aa16.33■□□□□ 0.2
TPM1-226ENST00000560959 GIN1Q9NXP7 522 aa16.33■□□□□ 0.2
TPM1-226ENST00000560959 SLC25A15Q9Y619 301 aa16.33■□□□□ 0.2
TPM1-226ENST00000560959 SLC35F4A4IF30 521 aa16.32■□□□□ 0.2
TPM1-226ENST00000560959 ETV2O00321 342 aaPredicted RBP16.32■□□□□ 0.2
TPM1-226ENST00000560959 PDPK1O15530 556 aa16.32■□□□□ 0.2
TPM1-226ENST00000560959 TBX19O60806 448 aa16.32■□□□□ 0.2
TPM1-226ENST00000560959 RSL1D1O76021 490 aaKnown RBP16.32■□□□□ 0.2
TPM1-226ENST00000560959 ALOX5P09917 674 aa16.32■□□□□ 0.2
TPM1-226ENST00000560959 PRKCAP17252 672 aa16.32■□□□□ 0.2
TPM1-226ENST00000560959 SLC7A1P30825 629 aa16.32■□□□□ 0.2
TPM1-226ENST00000560959 FRKP42685 505 aaPredicted RBP16.32■□□□□ 0.2
TPM1-226ENST00000560959 PRKAA2P54646 552 aa16.32■□□□□ 0.2
TPM1-226ENST00000560959 SRSF2Q01130 221 aaKnown RBP16.32■□□□□ 0.2
TPM1-226ENST00000560959 PDK3Q15120 406 aa16.32■□□□□ 0.2
TPM1-226ENST00000560959 DUSP5Q16690 384 aa16.32■□□□□ 0.2
TPM1-226ENST00000560959 IMPG1Q17R60 797 aa16.32■□□□□ 0.2
TPM1-226ENST00000560959 KLHL26Q53HC5 615 aa16.32■□□□□ 0.2
TPM1-226ENST00000560959 C1QTNF12Q5T7M4 302 aa16.32■□□□□ 0.2
TPM1-226ENST00000560959 FBXW9Q5XUX1 488 aa16.32■□□□□ 0.2
TPM1-226ENST00000560959 ZNF100Q8IYN0 542 aa16.32■□□□□ 0.2
TPM1-226ENST00000560959 ZNF527Q8NB42 609 aa16.32■□□□□ 0.2
TPM1-226ENST00000560959 ZFP28Q8NHY6 868 aa16.32■□□□□ 0.2
TPM1-226ENST00000560959 PHOSPHO1Q8TCT1 267 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms