RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 ETV2O00321 342 aaPredicted RBP13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 ZNF264O43296 627 aa13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 NTN1O95631 604 aa13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 TFPTP0C1Z6 253 aa13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 UBL4AP11441 157 aa13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 ZNF17P17021 662 aa13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 PGM1P36871 562 aa13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 ANXA11P50995 505 aaKnown RBP13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 ARFIP2P53365 341 aa13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 SF3A3Q12874 501 aaKnown RBP eCLIP13.77□□□□□ -0.212e-7■■■■■ 43
SNRPA1-213ENST00000560856 FGFBP1Q14512 234 aa13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 SF3B4Q15427 424 aaKnown RBP eCLIP13.77□□□□□ -0.213e-9■■■■□ 24.3
SNRPA1-213ENST00000560856 RGNQ15493 299 aa13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 GPAT3Q53EU6 434 aa13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 PLXDC2Q6UX71 529 aa13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 HMGN2P46Q86SG4 172 aa13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 GGNQ86UU5 652 aa13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 MED12LQ86YW9 2145 aa13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 C9orf106Q8NAJ2 232 aa13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 CA5BP1Q8WTZ4 195 aa13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 TSPEARQ8WU66 669 aa13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 SLC38A5Q8WUX1 472 aa13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 ZBTB8AQ96BR9 441 aa13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 TRIB1Q96RU8 372 aa13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 IKZF5Q9H5V7 419 aa13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 MTHFD2LQ9H903 347 aaPredicted RBP13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 CELSR2Q9HCU4 2923 aa13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 AP4B1Q9Y6B7 739 aa13.77□□□□□ -0.21
SNRPA1-213ENST00000560856 DSPPQ9NZW4 1301 aa13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 AGAP5A6NIR3 686 aa13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 CLDN24A6NM45 220 aa13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 CLCA1A8K7I4 914 aa13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 H0Y3Z8 333 aa13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 GTPBP1O00178 669 aaKnown RBP13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 CSTAP01040 98 aa13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 NUDT7P0C024 238 aa13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 NR2F1P10589 423 aa13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 POU3F2P20265 443 aaPredicted RBP13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 IL11P20809 199 aa13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 CRATP43155 626 aa13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 ZNF136P52737 540 aa13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 DSTNP60981 165 aa13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 KCNJ10P78508 379 aa13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 SLC25A53Q5H9E4 307 aa13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 ZNF787Q6DD87 383 aa13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 EIF3MQ7L2H7 374 aaKnown RBP13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 DPP10Q8N608 796 aa13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 TOR1AIP2Q8NFQ8 470 aa13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 OR5W2Q8NH69 310 aa13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 PMM1Q92871 262 aa13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 ADGRG7Q96K78 797 aa13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 RNF145Q96MT1 663 aa13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 SAR1AQ9NR31 198 aa13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 NOTCH2Q04721 2471 aa13.76□□□□□ -0.21
SNRPA1-213ENST00000560856 CACNA1DQ01668 2161 aa13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 HSPB2A8KAH6 182 aa13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 FAM47E-STBD1D6RA91 191 aa13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 H3BML4 177 aa13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 ADAM11O75078 769 aa13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 TGM6O95932 706 aa13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 PRKCAP17252 672 aa13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 ZNF41P51814 821 aaPredicted RBP13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 DLX5P56178 289 aa13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 RAC1P63000 192 aa13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 FOXF1Q12946 379 aa13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 FADDQ13158 208 aa13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 HSPB2Q16082 182 aa13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 CTU2Q2VPK5 515 aaKnown RBP13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 UBQLNLQ8IYU4 475 aa13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 METTL25Q8N6Q8 603 aa13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 C10orf82Q8WW14 230 aa13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 CNOT9Q92600 299 aaKnown RBP13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 WNT2BQ93097 391 aa13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 RSPO3Q9BXY4 272 aaPredicted RBP13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 NPDC1Q9NQX5 325 aaPredicted RBP13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 KLHL14Q9P2G3 628 aa13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 P2RX2Q9UBL9 471 aa13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 LEF1Q9UJU2 399 aaPredicted RBP13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 SLC35A3Q9Y2D2 325 aa13.75□□□□□ -0.21
SNRPA1-213ENST00000560856 ITPR2Q14571 2701 aa13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 NKX2-6A6NCS4 301 aa13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 FAM90A27PA6NNH2 459 aa13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 FBP2O00757 339 aa13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 ADAMDEC1O15204 470 aa13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 RCBTB2O95199 551 aa13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 UBTFL6P0CB48 400 aaPredicted RBP13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 GPX2P18283 190 aa13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 ADH6P28332 368 aa13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 SHC1P29353 583 aa13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 EIF1P41567 113 aaKnown RBP13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 QPRTQ15274 297 aa13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 RUNDC3AQ59EK9 446 aa13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 MEIOBQ8N635 442 aa13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 RELL2Q8NC24 303 aaPredicted RBP13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 FBXO27Q8NI29 283 aa13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 TMEM19Q96HH6 336 aa13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 ZNF845Q96IR2 970 aaPredicted RBP13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 TREX2Q9BQ50 279 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms