RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 GLIPR2Q9H4G4 154 aa15.74■□□□□ 0.11
TSPAN3-208ENST00000560514 EML4Q9HC35 981 aaKnown RBP15.74■□□□□ 0.11
TSPAN3-208ENST00000560514 NPAP1Q9NZP6 1156 aa15.74■□□□□ 0.11
TSPAN3-208ENST00000560514 PRPS2P11908 318 aa15.73■□□□□ 0.11
TSPAN3-208ENST00000560514 SHC1P29353 583 aa15.73■□□□□ 0.11
TSPAN3-208ENST00000560514 SLC7A1P30825 629 aa15.73■□□□□ 0.11
TSPAN3-208ENST00000560514 PDLIM4P50479 330 aa15.73■□□□□ 0.11
TSPAN3-208ENST00000560514 ZNF83P51522 516 aa15.73■□□□□ 0.11
TSPAN3-208ENST00000560514 FOXF1Q12946 379 aa15.73■□□□□ 0.11
TSPAN3-208ENST00000560514 TMEM176BQ3YBM2 270 aaPredicted RBP15.73■□□□□ 0.11
TSPAN3-208ENST00000560514 ARL13AQ5H913 290 aaPredicted RBP15.73■□□□□ 0.11
TSPAN3-208ENST00000560514 SPDYAQ5MJ70 313 aa15.73■□□□□ 0.11
TSPAN3-208ENST00000560514 ZNF544Q6NX49 715 aa15.73■□□□□ 0.11
TSPAN3-208ENST00000560514 ZNF100Q8IYN0 542 aa15.73■□□□□ 0.11
TSPAN3-208ENST00000560514 ATP6V1C2Q8NEY4 427 aa15.73■□□□□ 0.11
TSPAN3-208ENST00000560514 FAM110BQ8TC76 370 aa15.73■□□□□ 0.11
TSPAN3-208ENST00000560514 DCAKDQ8WVC6 231 aa15.73■□□□□ 0.11
TSPAN3-208ENST00000560514 MSI2Q96DH6 328 aaKnown RBP15.73■□□□□ 0.11
TSPAN3-208ENST00000560514 C16orf45Q96MC5 204 aaPredicted RBP15.73■□□□□ 0.11
TSPAN3-208ENST00000560514 AMDHD1Q96NU7 426 aa15.73■□□□□ 0.11
TSPAN3-208ENST00000560514 UBQLN4Q9NRR5 601 aa15.73■□□□□ 0.11
TSPAN3-208ENST00000560514 FKBP7Q9Y680 259 aa15.73■□□□□ 0.11
TSPAN3-208ENST00000560514 IGHV3-15A0A0B4J1V0 119 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 GOLGA8QA0A0J9YX86 632 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 CIB4A0PJX0 185 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 CCDC151A5D8V7 595 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 GOLGA8OA6NCC3 632 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 OR5H1A6NKK0 313 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 TRIM49D1C9J1S8 452 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 GOLGA8NF8WBI6 632 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 GOLGA8RI6L899 631 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 KIF2AO00139 706 aaPredicted RBP15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 SUPT7LO94864 414 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 TGFAP01135 160 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 ABHD2P08910 425 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 IGHV1-2P23083 117 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 ECHS1P30084 290 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 GPC1P35052 558 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 HSD17B3P37058 310 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 IQCCQ4KMZ1 466 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 TEX35Q5T0J7 233 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 FAM219BQ5XKK7 198 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 GALNT18Q6P9A2 607 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 GPRIN3Q6ZVF9 776 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 SZRD1Q7Z422 152 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 MEX3DQ86XN8 651 aaKnown RBP15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 NOA1Q8NC60 698 aaKnown RBP15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 OR6Y1Q8NGX8 325 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 OR52N5Q8NH56 324 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 ZFP90Q8TF47 636 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 IQCGQ9H095 443 aaKnown RBP15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 BCO1Q9HAY6 547 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 ZNF225Q9UK10 706 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 ATP23Q9Y6H3 246 aa15.72■□□□□ 0.11
TSPAN3-208ENST00000560514 DYSFO75923 2080 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 POC1B-GALNT4F8VUJ3 575 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 NDUFS8O00217 210 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 ZNF195O14628 629 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 RGS14O43566 566 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 PGM3O95394 542 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 LINGO3P0C6S8 592 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 ENPP1P22413 925 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 CD40P25942 277 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 CFPP27918 469 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 SRP14P37108 136 aaKnown RBP15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 PRIM2P49643 509 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 PRKAG1P54619 331 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 CHRNEQ04844 493 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 RASGEF1BQ0VAM2 473 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 HSPB3Q12988 150 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 CARTPTQ16568 116 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 TRMT10CQ7L0Y3 403 aaKnown RBP15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 UBE2J2Q8N2K1 259 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 CDRT4Q8N9R6 151 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 CEP70Q8NHQ1 597 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 FBXO27Q8NI29 283 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 PSD2Q9BQI7 771 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 INPP5KQ9BT40 448 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 TRMOQ9BU70 441 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 CXorf36Q9H7Y0 433 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 MYNNQ9NPC7 610 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 TAS2R7Q9NYW3 318 aa15.71■□□□□ 0.11
TSPAN3-208ENST00000560514 CCT8L1PA6NM43 557 aa15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 A8MT66 165 aa15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 C9JVG2 144 aa15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 M0R1B8 84 aa15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 RAD51DO75771 328 aa15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 LY6HO94772 140 aa15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 NKX2-2O95096 273 aa15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 SBK3P0C264 359 aa15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 TAC1P20366 129 aa15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 COX5AP20674 150 aa15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 LCN1P31025 176 aa15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 NR4A2P43354 598 aa15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 RAC3P60763 192 aa15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 SPOCK1Q08629 439 aa15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 PRSS53Q2L4Q9 553 aa15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 CR1LQ2VPA4 569 aa15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 BHLHB9Q6PI77 547 aa15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms