RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 SFXN3Q9BWM7 321 aa13.66□□□□□ -0.22
SNRPA1-210ENST00000560383 POLDIP3Q9BY77 421 aaKnown RBP13.66□□□□□ -0.22
SNRPA1-210ENST00000560383 CLEC4MQ9H2X3 399 aaPredicted RBP13.66□□□□□ -0.22
SNRPA1-210ENST00000560383 ACBD3Q9H3P7 528 aa13.66□□□□□ -0.22
SNRPA1-210ENST00000560383 TCF7L2Q9NQB0 619 aa13.66□□□□□ -0.22
SNRPA1-210ENST00000560383 EDARQ9UNE0 448 aa13.66□□□□□ -0.22
SNRPA1-210ENST00000560383 VDAC3Q9Y277 283 aa13.66□□□□□ -0.22
SNRPA1-210ENST00000560383 ZNF175Q9Y473 711 aa13.66□□□□□ -0.22
SNRPA1-210ENST00000560383 MTORP42345 2549 aa13.66□□□□□ -0.22
SNRPA1-210ENST00000560383 SETD2Q9BYW2 2564 aaPredicted RBP13.66□□□□□ -0.22
SNRPA1-210ENST00000560383 PRAMEF27A3QJZ7 478 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 SERINC4A6NH21 518 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 A6NNC1 897 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 SHISA8B8ZZ34 492 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 H3BML4 177 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 ETV2O00321 342 aaPredicted RBP13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 HMGN4O00479 90 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 ADAMDEC1O15204 470 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 GMFGO60234 142 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 KIAA0513O60268 411 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 EIF4E2O60573 245 aaKnown RBP13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 UGT2B17O75795 530 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 CRHP06850 196 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 ADH6P28332 368 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 CHI3L1P36222 383 aaPredicted RBP13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 EIF1P41567 113 aaKnown RBP13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 ZNF41P51814 821 aaPredicted RBP13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 CASP9P55211 416 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 RAC1P63000 192 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 FOXF2Q12947 444 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 DAZAP2Q15038 168 aaPredicted RBP13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 PDZK1Q5T2W1 519 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 ATAD3BQ5T9A4 648 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 TYW3Q6IPR3 259 aaKnown RBP13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 TNFAIP8L2Q6P589 184 aaPredicted RBP13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 ZNF621Q6ZSS3 439 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 C16orf62Q7Z3J2 963 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 GRAMD2AQ8IUY3 354 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 UBQLNLQ8IYU4 475 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 TOR1AIP2Q8NFQ8 470 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 OR9I1Q8NGQ6 314 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 RAB8BQ92930 207 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 ROPN1LQ96C74 230 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 ADGRG7Q96K78 797 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 MAGEB18Q96M61 343 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 EBF4Q9BQW3 602 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 GPATCH1Q9BRR8 931 aaKnown RBP13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 STOML1Q9UBI4 398 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 ST6GALNAC2Q9UJ37 374 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 MKLN1Q9UL63 735 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 LIPT1Q9Y234 373 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 CARD8Q9Y2G2 431 aa13.65□□□□□ -0.22
SNRPA1-210ENST00000560383 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 CENPVL1A0A0U1RR11 272 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 FAM234BA2RU67 622 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 SLC22A20A6NK97 555 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 RFXANKO14593 260 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 POLR3GO15318 223 aaPredicted RBP13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 ZNF264O43296 627 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 TNFSF13O75888 250 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 NTN1O95631 604 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 ELK4P28324 431 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 POLR2JP52435 117 aaKnown RBP13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 MVDP53602 400 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 IST1P53990 364 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 SKP2Q13309 424 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 GPR68Q15743 365 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 CTU2Q2VPK5 515 aaKnown RBP13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 SLC25A53Q5H9E4 307 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 PLXDC2Q6UX71 529 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 FRRS1Q6ZNA5 592 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 CHMP1BQ7LBR1 199 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 RNF130Q86XS8 419 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 FAM71CQ8NEG0 241 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 OR5W2Q8NH69 310 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 GPR119Q8TDV5 335 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 ZFP90Q8TF47 636 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 NRGNQ92686 78 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 INTS12Q96CB8 462 aaKnown RBP13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 RNF145Q96MT1 663 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 TRNT1Q96Q11 434 aaKnown RBP13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 RNF122Q9H9V4 155 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 SLC6A13Q9NSD5 602 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 TMEM45AQ9NWC5 275 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 WDR45Q9Y484 360 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 PCNX3Q9H6A9 2034 aa13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 PRRC2AP48634 2157 aaKnown RBP13.64□□□□□ -0.23
SNRPA1-210ENST00000560383 EEF1E1-BLOC1S5C9J1V9 151 aa13.63□□□□□ -0.23
SNRPA1-210ENST00000560383 GTPBP1O00178 669 aaKnown RBP13.63□□□□□ -0.23
SNRPA1-210ENST00000560383 SEC14L5O43304 696 aa13.63□□□□□ -0.23
SNRPA1-210ENST00000560383 EEF1E1O43324 174 aaKnown RBP13.63□□□□□ -0.23
SNRPA1-210ENST00000560383 KRT75O95678 551 aa13.63□□□□□ -0.23
SNRPA1-210ENST00000560383 GSNP06396 782 aa13.63□□□□□ -0.23
SNRPA1-210ENST00000560383 UBL4AP11441 157 aa13.63□□□□□ -0.23
SNRPA1-210ENST00000560383 ANXA11P50995 505 aaKnown RBP13.63□□□□□ -0.23
SNRPA1-210ENST00000560383 AQP5P55064 265 aa13.63□□□□□ -0.23
SNRPA1-210ENST00000560383 RPS3AP61247 264 aaKnown RBP13.63□□□□□ -0.23
SNRPA1-210ENST00000560383 IRX1P78414 480 aaPredicted RBP13.63□□□□□ -0.23
SNRPA1-210ENST00000560383 FGFBP1Q14512 234 aa13.63□□□□□ -0.23
SNRPA1-210ENST00000560383 MAPK14Q16539 360 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms