RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 ACAA2P42765 397 aaKnown RBP7.48□□□□□ -1.21
SMAD3-212ENST00000559937 CAPZBP47756 277 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 GABRA4P48169 554 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 EMDP50402 254 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 GPR143P51810 404 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 HSD17B7P56937 341 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 FXYD6P3P58550 94 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 TAS2R43P59537 309 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 RPS25P62851 125 aaKnown RBP7.48□□□□□ -1.21
SMAD3-212ENST00000559937 PSG6Q00889 435 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 PLAURQ03405 335 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 POU4F2Q12837 409 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 SMAD4Q13485 552 aaKnown RBP7.48□□□□□ -1.21
SMAD3-212ENST00000559937 SERTAD2Q14140 314 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 FGFBP1Q14512 234 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 CRTC2Q53ET0 693 aaPredicted RBP7.48□□□□□ -1.21
SMAD3-212ENST00000559937 TCTE1Q5JU00 501 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 DDI2Q5TDH0 399 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 C22orf42Q6IC83 251 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 ARHGAP11AQ6P4F7 1023 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 FIGNL1Q6PIW4 674 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 XKRXQ6PP77 449 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 SMARCD3Q6STE5 483 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 METAP1DQ6UB28 335 aaPredicted RBP7.48□□□□□ -1.21
SMAD3-212ENST00000559937 LINC00114Q6XXX2 140 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 WDR88Q6ZMY6 472 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 ZNF438Q7Z4V0 828 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 C17orf82Q86X59 251 aaPredicted RBP7.48□□□□□ -1.21
SMAD3-212ENST00000559937 CPOQ8IVL8 374 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 GPALPP1Q8IXQ4 340 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 TMEFF1Q8IYR6 380 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 CARFQ8N187 725 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 CACTIN-AS1Q8N1I8 211 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 ACBD7Q8N6N7 88 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 ARIH2OSQ8N7S6 290 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 GDPD1Q8N9F7 314 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 ZBTB8BQ8NAP8 495 aaPredicted RBP7.48□□□□□ -1.21
SMAD3-212ENST00000559937 OR9A4Q8NGU2 314 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 CNOT9Q92600 299 aaKnown RBP7.48□□□□□ -1.21
SMAD3-212ENST00000559937 C1GALT1C1Q96EU7 318 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 VSTM2LQ96N03 204 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 SDHCQ99643 169 aaPredicted RBP7.48□□□□□ -1.21
SMAD3-212ENST00000559937 G6PC3Q9BUM1 346 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 SRRQ9GZT4 340 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 RAB33BQ9H082 229 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 Q9N2J8 555 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 FAM60AQ9NP50 221 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 PRTFDC1Q9NRG1 225 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 FBXO34Q9NWN3 711 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 DNAJB12Q9NXW2 375 aaKnown RBP7.48□□□□□ -1.21
SMAD3-212ENST00000559937 HAO2Q9NYQ3 351 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 NPAP1Q9NZP6 1156 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 PLEKHB1Q9UF11 243 aaPredicted RBP7.48□□□□□ -1.21
SMAD3-212ENST00000559937 PLCL2Q9UPR0 1127 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 SLC35A3Q9Y2D2 325 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 PCDHGB2Q9Y5G2 931 aa7.48□□□□□ -1.21
SMAD3-212ENST00000559937 A0A1B0GWA3 101 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 A0A1W2PR77 199 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 TLCD2A6NGC4 264 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 SLC9B1P1A6NJY1 282 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 RIIAD1A6NNX1 92 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 H0YIG0 161 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 SOCS6O14544 535 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 PLD2O14939 933 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 RGS5O15539 181 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 MBTPS2O43462 519 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 NTN1O95631 604 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 DLGAP3O95886 979 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 CH25HO95992 272 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 IFNGP01579 166 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 MSL3P1P0C860 447 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 GKN3PP0CG01 181 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 CHRNB1P11230 501 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 IMPDH2P12268 514 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 TYRP1P17643 537 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 CD27P26842 260 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 LCN1P31025 176 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 SDC2P34741 201 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 ATP6V1E1P36543 226 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 ADH7P40394 386 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 GPR3P46089 330 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 SEPHS1P49903 392 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 ATP12AP54707 1039 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 EPHA4P54764 986 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 PPP1CAP62136 330 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 ACTC1P68032 377 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 ACTA1P68133 377 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 FOXK2Q01167 660 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 FABP5Q01469 135 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 FUT7Q11130 342 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 STX4Q12846 297 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 HNRNPA0Q13151 305 aaKnown RBP7.47□□□□□ -1.21
SMAD3-212ENST00000559937 SLC13A2Q13183 592 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 RIN1Q13671 783 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 GALEQ14376 348 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.47□□□□□ -1.21
SMAD3-212ENST00000559937 PDZK1Q5T2W1 519 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 MZT2AQ6P582 158 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 ULK3Q6PHR2 472 aa7.47□□□□□ -1.21
SMAD3-212ENST00000559937 ZNF322Q6U7Q0 402 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms