RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 EEF1E1-BLOC1S5C9J1V9 151 aa13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 EEF1E1O43324 174 aaKnown RBP13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 EDF1O60869 148 aaKnown RBP13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 SOX30O94993 753 aa13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 RCBTB2O95199 551 aa13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 AGR2O95994 175 aa13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 CSTAP01040 98 aa13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 UBTFL6P0CB48 400 aaPredicted RBP13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 ZNF17P17021 662 aa13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 SFTPDP35247 375 aa13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 EIF1AXP47813 144 aaKnown RBP13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 MVDP53602 400 aa13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 PON3Q15166 354 aa13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 MAPK11Q15759 364 aa13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 DMRTC2Q8IXT2 367 aaPredicted RBP13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 ZNF619Q8N2I2 560 aa13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 ACBD4Q8NC06 268 aa13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 FNDC9Q8TBE3 224 aa13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 GPR119Q8TDV5 335 aa13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 UCN2Q96RP3 112 aa13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 TM9SF2Q99805 663 aa13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 THUMPD3Q9BV44 507 aaKnown RBP13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 PAIP1Q9H074 479 aaKnown RBP13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 RMND5AQ9H871 391 aa13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 ITPR2Q14571 2701 aa13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 NAV2Q8IVL1 2488 aa13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 MAST4O15021 2626 aa13.35□□□□□ -0.27
RABGGTA-211ENST00000559850 A0A0J9YW62 118 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 C7orf72A4D263 438 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 LINC01387J3KSC0 135 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 TNFSF11O14788 317 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 CXCL13O43927 109 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 KRT75O95678 551 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 NR2F1P10589 423 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 PRKCAP17252 672 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 CAPN3P20807 821 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 CRATP43155 626 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 SLC6A8P48029 635 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 ASCL1P50553 236 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 KRTAP10-9P60411 292 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 SIRPAP78324 504 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 HPCAP84074 193 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 PLAURQ03405 335 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 LRRC74AQ0VAA2 488 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 SKP2Q13309 424 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 FGFBP1Q14512 234 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 QPRTQ15274 297 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 SGCBQ16585 318 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 CTU2Q2VPK5 515 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 AGKQ53H12 422 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 RPS26P11Q5JNZ5 115 aaPredicted RBP13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 GDF7Q7Z4P5 450 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 LUZP2Q86TE4 346 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 LILRA2Q8N149 483 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 OR10D3Q8NH80 312 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 GTF2H4Q92759 462 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 TREX2Q9BQ50 279 aaPredicted RBP13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 SLC38A1Q9H2H9 487 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 TPT1P8Q9HAU6 139 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 SLAMF8Q9P0V8 285 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 ZNF629Q9UEG4 869 aaPredicted RBP13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 FBN2P35556 2912 aa13.34□□□□□ -0.27
RABGGTA-211ENST00000559850 A0A0G2JND7 137 aa13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 A0A1W2PNV4 684 aa13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 EIF4E2O60573 245 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 AQP8O94778 261 aa13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 NUDT7P0C024 238 aa13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 NCF2P19878 526 aaPredicted RBP13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 OPRM1P35372 400 aa13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 PGM1P36871 562 aa13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 MRPL19P49406 292 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 EEFSECP57772 596 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 PAGE3Q5JUK9 113 aa13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 VWA1Q6PCB0 445 aa13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 BLOC1S3Q6QNY0 202 aa13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 MSANTD1Q6ZTZ1 278 aa13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 METTL25Q8N6Q8 603 aa13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 CNEP1R1Q8N9A8 125 aa13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 TOR1AIP2Q8NFQ8 470 aa13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 OR5W2Q8NH69 310 aa13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 OR2V1Q8NHB1 315 aa13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 SPDL1Q96EA4 605 aa13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 ADGRG7Q96K78 797 aa13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 LAT2Q9GZY6 243 aa13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 SAP130Q9H0E3 1048 aa13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 HHATLQ9HCP6 504 aa13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 SLC25A37Q9NYZ2 338 aa13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 CLEC4AQ9UMR7 237 aa13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 PCDHB14Q9Y5E9 798 aa13.33□□□□□ -0.28
RABGGTA-211ENST00000559850 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.32□□□□□ -0.28
RABGGTA-211ENST00000559850 TNFSF13O75888 250 aa13.32□□□□□ -0.28
RABGGTA-211ENST00000559850 SMNDC1O75940 238 aaKnown RBP eCLIP13.32□□□□□ -0.28
RABGGTA-211ENST00000559850 BCHEP06276 602 aa13.32□□□□□ -0.28
RABGGTA-211ENST00000559850 ZCCHC18P0CG32 403 aa13.32□□□□□ -0.28
RABGGTA-211ENST00000559850 HOXB9P17482 250 aaPredicted RBP13.32□□□□□ -0.28
RABGGTA-211ENST00000559850 RYKP34925 604 aa13.32□□□□□ -0.28
RABGGTA-211ENST00000559850 ANXA11P50995 505 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-211ENST00000559850 SUMO3P55854 103 aaPredicted RBP13.32□□□□□ -0.28
RABGGTA-211ENST00000559850 DSTNP60981 165 aa13.32□□□□□ -0.28
RABGGTA-211ENST00000559850 RPS3AP61247 264 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms