RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 POU3F2P20265 443 aaPredicted RBP16.88■□□□□ 0.29
CASC4-209ENST00000559222 MSX1P28360 303 aa16.88■□□□□ 0.29
CASC4-209ENST00000559222 ANXA11P50995 505 aaKnown RBP16.88■□□□□ 0.29
CASC4-209ENST00000559222 ZNF41P51814 821 aaPredicted RBP16.88■□□□□ 0.29
CASC4-209ENST00000559222 TXNL4AP83876 142 aaKnown RBP16.88■□□□□ 0.29
CASC4-209ENST00000559222 NFYCQ13952 458 aa16.88■□□□□ 0.29
CASC4-209ENST00000559222 REP15Q6BDI9 236 aa16.88■□□□□ 0.29
CASC4-209ENST00000559222 AAGABQ6PD74 315 aa16.88■□□□□ 0.29
CASC4-209ENST00000559222 ZNF808Q8N4W9 903 aaPredicted RBP16.88■□□□□ 0.29
CASC4-209ENST00000559222 POU5F2Q8N7G0 328 aa16.88■□□□□ 0.29
CASC4-209ENST00000559222 TNIP2Q8NFZ5 429 aa16.88■□□□□ 0.29
CASC4-209ENST00000559222 CGREF1Q99674 301 aa16.88■□□□□ 0.29
CASC4-209ENST00000559222 THUMPD3Q9BV44 507 aaKnown RBP16.88■□□□□ 0.29
CASC4-209ENST00000559222 TMEM185BQ9H7F4 350 aa16.88■□□□□ 0.29
CASC4-209ENST00000559222 A4GALTQ9NPC4 353 aa16.88■□□□□ 0.29
CASC4-209ENST00000559222 Q9UFV3 132 aa16.88■□□□□ 0.29
CASC4-209ENST00000559222 MED12LQ86YW9 2145 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 CLCA1A8K7I4 914 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 FXYD1O00168 92 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 AP3D1O14617 1153 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 NUDT14O95848 222 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 ARAFP10398 606 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 GABRA1P14867 456 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 FADDQ13158 208 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 MTFR2Q6P444 385 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 ENPP6Q6UWR7 440 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 ZNF836Q6ZNA1 936 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 GGNQ86UU5 652 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 TREML1Q86YW5 311 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 LIX1LQ8IVB5 337 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 PM20D2Q8IYS1 436 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 GTPBP8Q8N3Z3 284 aaPredicted RBP16.87■□□□□ 0.29
CASC4-209ENST00000559222 C9orf106Q8NAJ2 232 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 OR5W2Q8NH69 310 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 FBXO27Q8NI29 283 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 NFKBIDQ8NI38 313 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 TSPEARQ8WU66 669 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 WDR60Q8WVS4 1066 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 ANKRD27Q96NW4 1050 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 TREX2Q9BQ50 279 aaPredicted RBP16.87■□□□□ 0.29
CASC4-209ENST00000559222 PIGQQ9BRB3 760 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 LAT2Q9GZY6 243 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 DNAJB12Q9NXW2 375 aaKnown RBP16.87■□□□□ 0.29
CASC4-209ENST00000559222 CHST2Q9Y4C5 530 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 GMEB1Q9Y692 573 aa16.87■□□□□ 0.29
CASC4-209ENST00000559222 HCFC1P51610 2035 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 A0A087WZY1 265 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 LOC100653049A0A140TA62 436 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 AHRRA9YTQ3 701 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 C19orf84I3L1E1 186 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 EIF4E2O60573 245 aaKnown RBP16.86■□□□□ 0.29
CASC4-209ENST00000559222 KRT34O76011 436 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 EPPINO95925 133 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 PEPDP12955 493 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 ZNF17P17021 662 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 PRKCAP17252 672 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 GPX2P18283 190 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 GCKP35557 465 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 MAGEA8P43361 318 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 SUMO3P55854 103 aaPredicted RBP16.86■□□□□ 0.29
CASC4-209ENST00000559222 KCNJ10P78508 379 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 QPRTQ15274 297 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 ADRM1Q16186 407 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 GLYR1Q49A26 553 aaPredicted RBP16.86■□□□□ 0.29
CASC4-209ENST00000559222 GCNT6Q5T4J0 391 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 TMEM211Q6ICI0 200 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 EIF3MQ7L2H7 374 aaKnown RBP16.86■□□□□ 0.29
CASC4-209ENST00000559222 MAMDC2Q7Z304 686 aaPredicted RBP16.86■□□□□ 0.29
CASC4-209ENST00000559222 ADGRE4PQ86SQ3 457 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 OR10Q1Q8NGQ4 319 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 RND1Q92730 232 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 ZNF845Q96IR2 970 aaPredicted RBP16.86■□□□□ 0.29
CASC4-209ENST00000559222 UCK2Q9BZX2 261 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 RLIMQ9NVW2 624 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 CLCF1Q9UBD9 225 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 CAPN7Q9Y6W3 813 aa16.86■□□□□ 0.29
CASC4-209ENST00000559222 C7orf72A4D263 438 aa16.85■□□□□ 0.29
CASC4-209ENST00000559222 GMNCA6NCL1 334 aa16.85■□□□□ 0.29
CASC4-209ENST00000559222 NKX2-6A6NCS4 301 aa16.85■□□□□ 0.29
CASC4-209ENST00000559222 FAM90A27PA6NNH2 459 aa16.85■□□□□ 0.29
CASC4-209ENST00000559222 MRASO14807 208 aa16.85■□□□□ 0.29
CASC4-209ENST00000559222 SNX3O60493 162 aa16.85■□□□□ 0.29
CASC4-209ENST00000559222 DNAJA2O60884 412 aa16.85■□□□□ 0.29
CASC4-209ENST00000559222 NTN1O95631 604 aa16.85■□□□□ 0.29
CASC4-209ENST00000559222 RYKP34925 604 aa16.85■□□□□ 0.29
CASC4-209ENST00000559222 SMSP52788 366 aa16.85■□□□□ 0.29
CASC4-209ENST00000559222 CRISP3P54108 245 aa16.85■□□□□ 0.29
CASC4-209ENST00000559222 CTU2Q2VPK5 515 aaKnown RBP16.85■□□□□ 0.29
CASC4-209ENST00000559222 MRPL2Q5T653 305 aaKnown RBP16.85■□□□□ 0.29
CASC4-209ENST00000559222 NSUN5P2Q63ZY6 315 aa16.85■□□□□ 0.29
CASC4-209ENST00000559222 COMTD1Q86VU5 262 aa16.85■□□□□ 0.29
CASC4-209ENST00000559222 PTOV1Q86YD1 416 aa16.85■□□□□ 0.29
CASC4-209ENST00000559222 EID3Q8N140 333 aa16.85■□□□□ 0.29
CASC4-209ENST00000559222 OR52P1PQ8NH57 321 aa16.85■□□□□ 0.29
CASC4-209ENST00000559222 ZPLD1Q8TCW7 415 aa16.85■□□□□ 0.29
CASC4-209ENST00000559222 ZBTB8AQ96BR9 441 aa16.85■□□□□ 0.29
CASC4-209ENST00000559222 DTNBP1Q96EV8 351 aa16.85■□□□□ 0.29
CASC4-209ENST00000559222 CCDC106Q9BWC9 280 aa16.85■□□□□ 0.29
CASC4-209ENST00000559222 RAD21L1Q9H4I0 556 aa16.85■□□□□ 0.29
CASC4-209ENST00000559222 MTHFD2LQ9H903 347 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms