RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 C9orf85Q96MD7 179 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 PRICKLE1Q96MT3 831 aaPredicted RBP1.88□□□□□ -2.11
GABPB1-209ENST00000559100 TSNARE1Q96NA8 513 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 CLCC1Q96S66 551 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 NPY6RQ99463 290 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 CHRDL1Q9BU40 450 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 MCRIP2Q9BUT9 160 aaKnown RBP1.88□□□□□ -2.11
GABPB1-209ENST00000559100 LRRC61Q9BV99 259 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 NUP58Q9BVL2 599 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 GLT8D2Q9H1C3 349 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 NCOR1P1Q9H4R4 102 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 AMBNQ9NP70 447 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 MEPEQ9NQ76 525 aaPredicted RBP1.88□□□□□ -2.11
GABPB1-209ENST00000559100 EXOSC3Q9NQT5 275 aaKnown RBP1.88□□□□□ -2.11
GABPB1-209ENST00000559100 PNO1Q9NRX1 252 aaKnown RBP1.88□□□□□ -2.11
GABPB1-209ENST00000559100 DDX18Q9NVP1 670 aaKnown RBP1.88□□□□□ -2.11
GABPB1-209ENST00000559100 KLHL28Q9NXS3 571 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 ZNF221Q9UK13 617 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 TMCO1Q9UM00 188 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 PRPF19Q9UMS4 504 aaKnown RBP1.88□□□□□ -2.11
GABPB1-209ENST00000559100 USP6P35125 1406 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 WDR81Q562E7 1941 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 NSD2O96028 1365 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.87□□□□□ -2.11
GABPB1-209ENST00000559100 IGHV3OR16-12A0A075B7B8 117 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 A0A087X002 238 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 A0A0U1RQS6 177 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 MEX3AA1L020 520 aaKnown RBP1.87□□□□□ -2.11
GABPB1-209ENST00000559100 SMCO3A2RU48 225 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 CCT8L1PA6NM43 557 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 E7ESA3 106 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 E9PAM4 449 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 G3V3Y1 287 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 HAS3O00219 553 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 NBR2O15453 112 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 RS1O15537 224 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 LINC01565O15544 149 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 ZNF264O43296 627 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 ZG16O60844 167 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 RAMP1O60894 148 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 DNAJB6O75190 326 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 UGT2B17O75795 530 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 ATP5LO75964 103 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 NOL4O94818 638 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 NDUFB10O96000 172 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 IGHV3-9P01782 118 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 HCKP08631 526 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 H2AFZP0C0S5 128 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 CFC1BP0CG36 223 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 CFC1P0CG37 223 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 UMPSP11172 480 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 SFTPCP11686 197 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 POLR2EP19388 210 aaKnown RBP1.87□□□□□ -2.11
GABPB1-209ENST00000559100 CHMLP26374 656 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 NMT1P30419 496 aaKnown RBP1.87□□□□□ -2.11
GABPB1-209ENST00000559100 CASP14P31944 242 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 YWHABP31946 246 aaKnown RBP1.87□□□□□ -2.11
GABPB1-209ENST00000559100 CDH5P33151 784 aaPredicted RBP1.87□□□□□ -2.11
GABPB1-209ENST00000559100 UGT1A5P35504 534 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 GSK3BP49841 420 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 PKNOX1P55347 436 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 RIPK4P57078 832 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 ERVK11-1P61568 191 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 RND3P61587 244 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 VLDLRP98155 873 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 OGDHQ02218 1023 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 OC90Q02509 493 aaPredicted RBP1.87□□□□□ -2.11
GABPB1-209ENST00000559100 ENPEPQ07075 957 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 TGM3Q08188 693 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 SLC10A7Q0GE19 358 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 COX10Q12887 443 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 ZNF154Q13106 437 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 CYLC2Q14093 348 aaPredicted RBP1.87□□□□□ -2.11
GABPB1-209ENST00000559100 SERTAD2Q14140 314 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 LAGE3Q14657 143 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 PCK2Q16822 640 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 KLHL38Q2WGJ6 581 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 SLC25A52Q3SY17 297 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 TMEM52BQ4KMG9 183 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 ZNF506Q5JVG8 444 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 LINC00242Q5T6M2 205 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 C9orf66Q5T8R8 295 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 ZNF57Q68EA5 555 aaPredicted RBP1.87□□□□□ -2.11
GABPB1-209ENST00000559100 RNASEKQ6P5S7 137 aaKnown RBP1.87□□□□□ -2.11
GABPB1-209ENST00000559100 METAP1DQ6UB28 335 aaPredicted RBP1.87□□□□□ -2.11
GABPB1-209ENST00000559100 USP43Q70EL4 1123 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 DHDDSQ86SQ9 333 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 PAQR7Q86WK9 346 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 ECHDC2Q86YB7 292 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 PHC2Q8IXK0 858 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 ALLCQ8N6M5 410 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 FAM83FQ8NEG4 500 aaPredicted RBP1.87□□□□□ -2.11
GABPB1-209ENST00000559100 SPATA4Q8NEY3 305 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 CCDC148Q8NFR7 591 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 OR4D9Q8NGE8 314 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 FAM81AQ8TBF8 368 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 FNDC8Q8TC99 324 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 TCTEX1D2Q8WW35 142 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 TAF15Q92804 592 aaKnown RBP eCLIP1.87□□□□□ -2.11
GABPB1-209ENST00000559100 EFHD2Q96C19 240 aaPredicted RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms