RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 MKLN1Q9UL63 735 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 ICAM5Q9UMF0 924 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 ZNF232Q9UNY5 417 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 VDAC3Q9Y277 283 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 CARD8Q9Y2G2 431 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 ZNF175Q9Y473 711 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 ADGRG4Q8IZF6 3080 aa7.66□□□□□ -1.18
TPM1-213ENST00000558400 A0A096LPI6 279 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 A0A0G2JND7 137 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 A0A1W2PP18 115 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 CLCA1A8K7I4 914 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 EVPLLA8MZ36 301 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 B4DXG7 233 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 C9JVG2 144 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 H3BML4 177 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 CLIC1O00299 241 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 ADAMDEC1O15204 470 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 KIAA0513O60268 411 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 DNAJA2O60884 412 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 H6PDO95479 791 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 VIMP08670 466 aaKnown RBP7.65□□□□□ -1.18
TPM1-213ENST00000558400 LINGO3P0C6S8 592 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 PABPC4LP0CB38 370 aaKnown RBP7.65□□□□□ -1.18
TPM1-213ENST00000558400 UBL4AP11441 157 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 PGCP20142 388 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 ELK4P28324 431 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 CDKN2CP42773 168 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 CRATP43155 626 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 CRISP3P54108 245 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 CASP9P55211 416 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 KCNJ10P78508 379 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 ZNF117Q03924 483 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 FGFBP1Q14512 234 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 NCOA6Q14686 2063 aaPredicted RBP7.65□□□□□ -1.18
TPM1-213ENST00000558400 CD226Q15762 336 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 PLPPR5Q32ZL2 321 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 TIGD2Q4W5G0 525 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 AGKQ53H12 422 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 DCST1Q5T197 706 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 PRAMEF8Q5VWM4 474 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 PRAMEF7Q5VXH5 474 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 TYW3Q6IPR3 259 aaKnown RBP7.65□□□□□ -1.18
TPM1-213ENST00000558400 ESPNLQ6ZVH7 1005 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 SEM1Q6ZVN7 128 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 P4HA3Q7Z4N8 544 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 KIF18BQ86Y91 864 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 GRAMD2AQ8IUY3 354 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 FUNDC1Q8IVP5 155 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 PEX5LQ8IYB4 626 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 METTL25Q8N6Q8 603 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 OR9I1Q8NGQ6 314 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 GPR119Q8TDV5 335 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 ST8SIA1Q92185 356 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 SFXN3Q9BWM7 321 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 UCK2Q9BZX2 261 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 PIGMQ9H3S5 423 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 CCDC134Q9H6E4 229 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 CACYBPQ9HB71 228 aaKnown RBP7.65□□□□□ -1.18
TPM1-213ENST00000558400 NPHS2Q9NP85 383 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 SERINC1Q9NRX5 453 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 P2RX2Q9UBL9 471 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 DCTN4Q9UJW0 460 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 CORO2BQ9UQ03 480 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 NDUFAF1Q9Y375 327 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 PCDHB14Q9Y5E9 798 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 GMEB1Q9Y692 573 aa7.65□□□□□ -1.18
TPM1-213ENST00000558400 CELSR1Q9NYQ6 3014 aa7.65□□□□□ -1.19
TPM1-213ENST00000558400 PHF3Q92576 2039 aaKnown RBP7.64□□□□□ -1.19
TPM1-213ENST00000558400 EXPH5Q8NEV8 1989 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 NPIPA5A0A0B4J1W7 369 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 A0A0G2JPF8 293 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 AGAP5A6NIR3 686 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 SLC22A20A6NK97 555 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 C17orf51A8MQB3 221 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 HNRNPCL2B2RXH8 293 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 HNRNPCL3B7ZW38 293 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 NPIPA7E9PJI5 369 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 ETV2O00321 342 aaPredicted RBP7.64□□□□□ -1.19
TPM1-213ENST00000558400 GMFGO60234 142 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 HNRNPCL1O60812 293 aaKnown RBP7.64□□□□□ -1.19
TPM1-213ENST00000558400 DBIP07108 87 aaKnown RBP7.64□□□□□ -1.19
TPM1-213ENST00000558400 TFPTP0C1Z6 253 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 NPIPA8P0DM63 369 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 HNRNPCL4P0DMR1 293 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 TMIGD3P0DMS9 266 aaPredicted RBP7.64□□□□□ -1.19
TPM1-213ENST00000558400 FCGR2AP12318 317 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 UQCRBP14927 111 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 IL7RP16871 459 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 BMP5P22003 454 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 TCEA1P23193 301 aaKnown RBP7.64□□□□□ -1.19
TPM1-213ENST00000558400 PSMA4P25789 261 aaKnown RBP7.64□□□□□ -1.19
TPM1-213ENST00000558400 ADSLP30566 484 aaPredicted RBP7.64□□□□□ -1.19
TPM1-213ENST00000558400 MDH1P40925 334 aaKnown RBP7.64□□□□□ -1.19
TPM1-213ENST00000558400 HTR3AP46098 478 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 SLC6A8P48029 635 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 MAP2K6P52564 334 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 ARFIP2P53365 341 aa7.64□□□□□ -1.19
TPM1-213ENST00000558400 SUCLG1P53597 346 aaKnown RBP7.64□□□□□ -1.19
TPM1-213ENST00000558400 CLDN15P56746 228 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms