RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 LAT2Q9GZY6 243 aa8.12□□□□□ -1.11
SPG11-207ENST00000558138 CHST11Q9NPF2 352 aa8.12□□□□□ -1.11
SPG11-207ENST00000558138 KCNJ16Q9NPI9 418 aa8.12□□□□□ -1.11
SPG11-207ENST00000558138 SERINC1Q9NRX5 453 aa8.12□□□□□ -1.11
SPG11-207ENST00000558138 MCTS1Q9ULC4 181 aaKnown RBP8.12□□□□□ -1.11
SPG11-207ENST00000558138 ZNF232Q9UNY5 417 aa8.12□□□□□ -1.11
SPG11-207ENST00000558138 ANGPT4Q9Y264 503 aa8.12□□□□□ -1.11
SPG11-207ENST00000558138 GPC6Q9Y625 555 aaPredicted RBP8.12□□□□□ -1.11
SPG11-207ENST00000558138 AP4B1Q9Y6B7 739 aa8.12□□□□□ -1.11
SPG11-207ENST00000558138 RELNP78509 3460 aa8.12□□□□□ -1.11
SPG11-207ENST00000558138 A0A0G2JNJ9 132 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 LOC100653049A0A140TA62 436 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 WIPF3A6NGB9 483 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 SLC22A20A6NK97 555 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 BBIP1A8MTZ0 92 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 B4DXG7 233 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 NPIPB9F8W1W9 429 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 TNFSF11O14788 317 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 MRASO14807 208 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 OIP5O43482 229 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 CCDC22O60826 627 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 KRT34O76011 436 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 EPPINO95925 133 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 LINGO3P0C6S8 592 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 TMIGD3P0DMS9 266 aaPredicted RBP8.11□□□□□ -1.11
SPG11-207ENST00000558138 TFPIP10646 304 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 COX6B1P14854 86 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 SLC6A2P23975 617 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 COL8A1P27658 744 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 SLC6A8P48029 635 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 CPA2P48052 419 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 AGFG1P52594 562 aaKnown RBP8.11□□□□□ -1.11
SPG11-207ENST00000558138 SEC24CP53992 1094 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 GYS2P54840 703 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 CLDN15P56746 228 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 CLDN18P56856 261 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 MTPNP58546 118 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 COPZ1P61923 177 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 SIRPAP78324 504 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 KCNJ10P78508 379 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 MERTKQ12866 999 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 KLF10Q13118 480 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 ART3Q13508 389 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 CYLC2Q14093 348 aaPredicted RBP8.11□□□□□ -1.11
SPG11-207ENST00000558138 CAPRIN1Q14444 709 aaKnown RBP8.11□□□□□ -1.11
SPG11-207ENST00000558138 PON3Q15166 354 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 MAPK14Q16539 360 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 LRIF1Q5T3J3 769 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 REP15Q6BDI9 236 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 HIST2H2BCQ6DN03 193 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 RTL6Q6ICC9 239 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 CGB2Q6NT52 195 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 PLXDC2Q6UX71 529 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 SNX32Q86XE0 403 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 KRT73Q86Y46 540 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 MCEMP1Q8IX19 187 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 CMIPQ8IY22 773 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 LILRA2Q8N149 483 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 GTPBP8Q8N3Z3 284 aaPredicted RBP8.11□□□□□ -1.11
SPG11-207ENST00000558138 CNEP1R1Q8N9A8 125 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 PCYOX1LQ8NBM8 494 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 TNIP2Q8NFZ5 429 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 BBS10Q8TAM1 723 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 ZPLD1Q8TCW7 415 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 C10orf82Q8WW14 230 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 OIT3Q8WWZ8 545 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 MAL2Q969L2 176 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 NTNG2Q96CW9 530 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 ARSGQ96EG1 525 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 TM9SF2Q99805 663 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 SPATA5L1Q9BVQ7 753 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 UCK2Q9BZX2 261 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 SLC38A1Q9H2H9 487 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 RUBCNLQ9H714 662 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 MTHFD2LQ9H903 347 aaPredicted RBP8.11□□□□□ -1.11
SPG11-207ENST00000558138 CALHM2Q9HA72 323 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 A4GALTQ9NPC4 353 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 TIGARQ9NQ88 270 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 SLC25A37Q9NYZ2 338 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 VAPAQ9P0L0 249 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 SLAMF8Q9P0V8 285 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 ARMCX1Q9P291 453 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 Q9UFV3 132 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 ICAM5Q9UMF0 924 aa8.11□□□□□ -1.11
SPG11-207ENST00000558138 KLF2Q9Y5W3 355 aaPredicted RBP8.11□□□□□ -1.11
SPG11-207ENST00000558138 SPIN1Q9Y657 262 aaPredicted RBP8.11□□□□□ -1.11
SPG11-207ENST00000558138 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 A0A0G2JPF8 293 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 PRAMEF27A3QJZ7 478 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 GMNCA6NCL1 334 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 AGAP5A6NIR3 686 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 CD8B2A6NJW9 211 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 CLDN24A6NM45 220 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 HNRNPCL2B2RXH8 293 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 HNRNPCL3B7ZW38 293 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 H0YC42 278 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 HNRNPCL1O60812 293 aaKnown RBP8.1□□□□□ -1.11
SPG11-207ENST00000558138 SMNDC1O75940 238 aaKnown RBP eCLIP8.1□□□□□ -1.11
SPG11-207ENST00000558138 GUSBP08236 651 aa8.1□□□□□ -1.11
SPG11-207ENST00000558138 NUDT7P0C024 238 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms