RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 SNTB2Q13425 540 aaKnown RBP10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 DYRK1AQ13627 763 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 FNDC3BQ53EP0 1204 aaKnown RBP10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 FRRS1Q6ZNA5 592 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 RANBP3LQ86VV4 465 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 C17orf47Q8NEP4 570 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 BEST4Q8NFU0 473 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 OR2L5Q8NG80 312 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 OR2A1Q8NGT9 310 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 HAVCR2Q8TDQ0 301 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 GIMAP5Q96F15 307 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 C4orf36Q96KX1 117 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 TEAD3Q99594 435 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 ZNF275Q9NSD4 429 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 EVA1BQ9NVM1 165 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 KLF15Q9UIH9 416 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 CAMK2AQ9UQM7 478 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 MAB21L2Q9Y586 359 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 TRAV1-2A0A0B4J238 106 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 ANTXRLA6NF34 631 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 TRABD2BA6NFA1 517 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 ZNF593O00488 134 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 RCBTB2O95199 551 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 CXCL14O95715 111 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 AGR2O95994 175 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 SERPINA3P01011 423 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 MRPL3P09001 348 aaKnown RBP10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 CERS1P27544 350 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 TEAD1P28347 426 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 PUDPQ08623 228 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 MFSD13AQ14CX5 517 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 DHCR24Q15392 516 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 EIPR1Q53HC9 387 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 HEPHL1Q6MZM0 1159 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 RPL13AP3Q6NVV1 102 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 ZNF836Q6ZNA1 936 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 CEP76Q8TAP6 659 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 MS4A3Q96HJ5 214 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 PGLYRP3Q96LB9 341 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 ERMAPQ96PL5 475 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 C1QTNF7Q9BXJ2 289 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 ZNF436Q9C0F3 470 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 OR51V1Q9H2C8 321 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 XKR8Q9H6D3 395 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 MRPS30Q9NP92 439 aaKnown RBP10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 CMC2Q9NRP2 79 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 ZMIZ1Q9ULJ6 1067 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 WDR45Q9Y484 360 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 NPTNQ9Y639 398 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 FKBP7Q9Y680 259 aa10.98□□□□□ -0.65
VIPAS39-211ENST00000557658 EDDM13A0A1B0GTR0 161 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 TRAPPC13A5PLN9 417 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 GSTZ1O43708 216 aaPredicted RBP10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 HYAL3O43820 417 aaPredicted RBP10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 FGF18O76093 207 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 SBK2P0C263 348 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 RRASP10301 218 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 SNRPBP14678 240 aaKnown RBP10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 LCN1P31025 176 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 RAB28P51157 221 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 FXYD6P3P58550 94 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 ERVK-21P61565 698 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 ZNF267Q14586 743 aaPredicted RBP10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 AGERQ15109 404 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 LTB4RQ15722 352 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 CEBPEQ15744 281 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 ZSWIM7Q19AV6 140 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 DMKNQ6E0U4 476 aaPredicted RBP10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 TMEM65Q6PI78 240 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 RNF113BQ8IZP6 322 aaKnown RBP10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 SRFBP1Q8NEF9 429 aaKnown RBP10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 OR2T35Q8NGX2 323 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 CDS1Q92903 461 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 PTP4A1Q93096 173 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 ARMC5Q96C12 935 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 ZNF681Q96N22 645 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 RBP7Q96R05 134 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 PRSS27Q9BQR3 290 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 IFT27Q9BW83 186 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 GSDMCQ9BYG8 508 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 BRD7Q9NPI1 651 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 ZNF223Q9UK11 482 aaPredicted RBP10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 ACSL5Q9ULC5 683 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 ABT1Q9ULW3 272 aaKnown RBP10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 CDHR4A6H8M9 788 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 M0R233 179 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 CTDSPLO15194 276 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 FLRT2O43155 660 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 PCCBP05166 539 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 PRG2P13727 222 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 ATF1P18846 271 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 FUT1P19526 365 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 MAKP20794 623 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 OR12D2P58182 307 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 VSX2P58304 361 aaPredicted RBP10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 CDK3Q00526 305 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 FOXK2Q01167 660 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 ZNF85Q03923 595 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 KLF9Q13886 244 aaPredicted RBP10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 SUZ12Q15022 739 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms