RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 TP53P04637 393 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-233ENST00000557529 LINGO3P0C6S8 592 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 NAGAP17050 411 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 FOLR3P41439 243 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 SLC6A8P48029 635 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 ALDH3B2P48448 385 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 LSM11P83369 360 aaKnown RBP eCLIP11.46□□□□□ -0.57
SHMT2-233ENST00000557529 PRKCDQ05655 676 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 NADK2Q4G0N4 442 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 C12orf73Q69YU5 71 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 C6orf15Q6UXA7 325 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-233ENST00000557529 CASP12Q6UXS9 341 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 PRR22Q8IZ63 422 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 NLGN4XQ8N0W4 816 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 CADM2Q8N3J6 435 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 CLDN22Q8N7P3 220 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 TEX47Q8TBZ9 253 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 PHOSPHO1Q8TCT1 267 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 GRHL3Q8TE85 626 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 IPCEF1Q8WWN9 437 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-233ENST00000557529 OSTF1Q92882 214 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 GPA33Q99795 319 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 TEX12Q9BXU0 123 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 PRRG3Q9BZD7 231 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 TBL1XR1Q9BZK7 514 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 LAT2Q9GZY6 243 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 IRF2BPLQ9H1B7 796 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 SLC25A19Q9HC21 320 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 PLCXD1Q9NUJ7 323 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 FLRT3Q9NZU0 649 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 CNIH4Q9P003 139 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 PADI1Q9ULC6 663 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 SNX5Q9Y5X3 404 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 DNAH14Q0VDD8 3507 aa11.46□□□□□ -0.57
SHMT2-233ENST00000557529 SH3D21A4FU49 640 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 HTR3EA5X5Y0 456 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 PLD2O14939 933 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 PIP5K1CO60331 668 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 EIF4E2O60573 245 aaKnown RBP11.45□□□□□ -0.58
SHMT2-233ENST00000557529 FAM20BO75063 409 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 ICOSLGO75144 302 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 PPM1BO75688 479 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 KLF7O75840 302 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-233ENST00000557529 UMODP07911 640 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 GABRB1P18505 474 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 GIPRP48546 466 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 SMSP52788 366 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 CTBP2P56545 445 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 SNRPGP62308 76 aaKnown RBP11.45□□□□□ -0.58
SHMT2-233ENST00000557529 TCF15Q12870 199 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 SKP2Q13309 424 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 GINS1Q14691 196 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 TRIP6Q15654 476 aaKnown RBP11.45□□□□□ -0.58
SHMT2-233ENST00000557529 CD226Q15762 336 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 EXT1Q16394 746 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 ALG10BQ5I7T1 473 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 TMEM164Q5U3C3 297 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 TMEM236Q5W0B7 351 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 WBP2NLQ6ICG8 309 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 WDR88Q6ZMY6 472 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 PTCHD4Q6ZW05 846 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 GLRX5Q86SX6 157 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 PIP4P1Q86T03 277 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 SATL1Q86VE3 508 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 OR8J1Q8NGP2 316 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 APH1BQ8WW43 257 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 UBE2FQ969M7 185 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 C8orf44Q96CB5 159 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 Q96MT0 163 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 NODALQ96S42 347 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 ZNF700Q9H0M5 742 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 DUSP21Q9H596 190 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 PARD6AQ9NPB6 346 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 CLN6Q9NWW5 311 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 ZNF226Q9NYT6 803 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 NPFFR2Q9Y5X5 522 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 CDH10Q9Y6N8 788 aa11.45□□□□□ -0.58
SHMT2-233ENST00000557529 UNC119BA6NIH7 251 aa11.44□□□□□ -0.58
SHMT2-233ENST00000557529 PTGES3LE9PB15 166 aa11.44□□□□□ -0.58
SHMT2-233ENST00000557529 NDUFB5O43674 189 aa11.44□□□□□ -0.58
SHMT2-233ENST00000557529 XPNPEP2O43895 674 aa11.44□□□□□ -0.58
SHMT2-233ENST00000557529 ADAM11O75078 769 aa11.44□□□□□ -0.58
SHMT2-233ENST00000557529 DLGAP3O95886 979 aa11.44□□□□□ -0.58
SHMT2-233ENST00000557529 RAB40ALP0C0E4 278 aa11.44□□□□□ -0.58
SHMT2-233ENST00000557529 IFI30P13284 250 aa11.44□□□□□ -0.58
SHMT2-233ENST00000557529 TTKP33981 857 aa11.44□□□□□ -0.58
SHMT2-233ENST00000557529 TMED10P49755 219 aaKnown RBP11.44□□□□□ -0.58
SHMT2-233ENST00000557529 CDK5Q00535 292 aa11.44□□□□□ -0.58
SHMT2-233ENST00000557529 PCOLCEQ15113 449 aa11.44□□□□□ -0.58
SHMT2-233ENST00000557529 NDUFAF6Q330K2 333 aa11.44□□□□□ -0.58
SHMT2-233ENST00000557529 RPL13AP3Q6NVV1 102 aa11.44□□□□□ -0.58
SHMT2-233ENST00000557529 SLC27A4Q6P1M0 643 aa11.44□□□□□ -0.58
SHMT2-233ENST00000557529 BORAQ6PGQ7 559 aa11.44□□□□□ -0.58
SHMT2-233ENST00000557529 KIRREL2Q6UWL6 708 aa11.44□□□□□ -0.58
SHMT2-233ENST00000557529 APOOLQ6UXV4 268 aa11.44□□□□□ -0.58
SHMT2-233ENST00000557529 LINC00114Q6XXX2 140 aa11.44□□□□□ -0.58
SHMT2-233ENST00000557529 KCTD8Q6ZWB6 473 aa11.44□□□□□ -0.58
SHMT2-233ENST00000557529 TMPRSS11FQ6ZWK6 438 aa11.44□□□□□ -0.58
SHMT2-233ENST00000557529 KIF18BQ86Y91 864 aa11.44□□□□□ -0.58
SHMT2-233ENST00000557529 MISPQ8IVT2 679 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms