RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 ZNF300Q96RE9 604 aaPredicted RBP12.49□□□□□ -0.41
SLIRP-210ENST00000557431 TRAF4Q9BUZ4 470 aaPredicted RBP12.49□□□□□ -0.41
SLIRP-210ENST00000557431 TRIM2Q9C040 744 aa12.49□□□□□ -0.41
SLIRP-210ENST00000557431 OR10A4Q9H209 315 aa12.49□□□□□ -0.41
SLIRP-210ENST00000557431 REEP4Q9H6H4 257 aa12.49□□□□□ -0.41
SLIRP-210ENST00000557431 ESRP2Q9H6T0 727 aaKnown RBP12.49□□□□□ -0.41
SLIRP-210ENST00000557431 ING1Q9UK53 422 aaPredicted RBP12.49□□□□□ -0.41
SLIRP-210ENST00000557431 TTC36A6NLP5 189 aa12.48□□□□□ -0.41
SLIRP-210ENST00000557431 TMEM233B4DJY2 109 aa12.48□□□□□ -0.41
SLIRP-210ENST00000557431 SHISA9B4DS77 424 aa12.48□□□□□ -0.41
SLIRP-210ENST00000557431 ZNF195O14628 629 aa12.48□□□□□ -0.41
SLIRP-210ENST00000557431 HMGN2P05204 90 aaKnown RBP12.48□□□□□ -0.41
SLIRP-210ENST00000557431 NGFRP08138 427 aa12.48□□□□□ -0.41
SLIRP-210ENST00000557431 ABHD2P08910 425 aa12.48□□□□□ -0.41
SLIRP-210ENST00000557431 ADH6P28332 368 aa12.48□□□□□ -0.41
SLIRP-210ENST00000557431 GALNTL6Q49A17 601 aa12.48□□□□□ -0.41
SLIRP-210ENST00000557431 VPS26BQ4G0F5 336 aa12.48□□□□□ -0.41
SLIRP-210ENST00000557431 RFTN2Q52LD8 501 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-210ENST00000557431 EXOSC6Q5RKV6 272 aaKnown RBP12.48□□□□□ -0.41
SLIRP-210ENST00000557431 CDC73Q6P1J9 531 aa12.48□□□□□ -0.41
SLIRP-210ENST00000557431 DNM1P46Q6ZS02 220 aa12.48□□□□□ -0.41
SLIRP-210ENST00000557431 HIPK1Q86Z02 1210 aa12.48□□□□□ -0.41
SLIRP-210ENST00000557431 OR6Y1Q8NGX8 325 aa12.48□□□□□ -0.41
SLIRP-210ENST00000557431 CEP70Q8NHQ1 597 aa12.48□□□□□ -0.41
SLIRP-210ENST00000557431 ZFP28Q8NHY6 868 aa12.48□□□□□ -0.41
SLIRP-210ENST00000557431 FAM76AQ8TAV0 307 aa12.48□□□□□ -0.41
SLIRP-210ENST00000557431 PIWIL2Q8TC59 973 aaKnown RBP12.48□□□□□ -0.41
SLIRP-210ENST00000557431 ACTRT2Q8TDY3 377 aa12.48□□□□□ -0.41
SLIRP-210ENST00000557431 ZFP90Q8TF47 636 aa12.48□□□□□ -0.41
SLIRP-210ENST00000557431 CPNE4Q96A23 557 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-210ENST00000557431 TSPYL1Q9H0U9 437 aa12.48□□□□□ -0.41
SLIRP-210ENST00000557431 TUBB1Q9H4B7 451 aa12.48□□□□□ -0.41
SLIRP-210ENST00000557431 UBQLN4Q9NRR5 601 aa12.48□□□□□ -0.41
SLIRP-210ENST00000557431 ZCCHC3Q9NUD5 404 aaKnown RBP12.48□□□□□ -0.41
SLIRP-210ENST00000557431 C1orf109Q9NX04 203 aa12.48□□□□□ -0.41
SLIRP-210ENST00000557431 CISD1Q9NZ45 108 aaKnown RBP12.48□□□□□ -0.41
SLIRP-210ENST00000557431 A0A1W2PQD3 144 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 A0A1W2PR80 420 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 NPIPB8E9PQR5 432 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 TMCC2O75069 709 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 GLRA3O75311 464 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 PRKD3O94806 890 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 IGHV3-9P01782 118 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 THBS1P07996 1170 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 LINC00032P0C843 101 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 UROSP10746 265 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 PRKCAP17252 672 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 FRKP42685 505 aaPredicted RBP12.47□□□□□ -0.41
SLIRP-210ENST00000557431 CCR4P51679 360 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 CDH11P55287 796 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 IRX1P78414 480 aaPredicted RBP12.47□□□□□ -0.41
SLIRP-210ENST00000557431 ITGADQ13349 1161 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 PDE7AQ13946 482 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 CFAP157Q5JU67 520 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 LIPMQ5VYY2 423 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 GTF2IRD2BQ6EKJ0 949 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 GTF2IRD2Q86UP8 949 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 TMCO5AQ8N6Q1 288 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 CCDC63Q8NA47 563 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 OR7A2PQ8NGA2 310 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 FCRL1Q96LA6 429 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 HS6ST2Q96MM7 605 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 PSD2Q9BQI7 771 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 POTEKPQ9BYX7 375 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 QRSL1Q9H0R6 528 aaKnown RBP12.47□□□□□ -0.41
SLIRP-210ENST00000557431 ALG2Q9H553 416 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 NTMQ9P121 344 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 PSMC3IPQ9P2W1 217 aaPredicted RBP12.47□□□□□ -0.41
SLIRP-210ENST00000557431 B3GALT5Q9Y2C3 310 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 SNX8Q9Y5X2 465 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 STAB1Q9NY15 2570 aa12.47□□□□□ -0.41
SLIRP-210ENST00000557431 SMIM23A6NLE4 172 aa12.46□□□□□ -0.41
SLIRP-210ENST00000557431 ABCD4O14678 606 aa12.46□□□□□ -0.41
SLIRP-210ENST00000557431 SMAD9O15198 467 aaKnown RBP12.46□□□□□ -0.41
SLIRP-210ENST00000557431 PLIN3O60664 434 aa12.46□□□□□ -0.41
SLIRP-210ENST00000557431 H6PDO95479 791 aa12.46□□□□□ -0.41
SLIRP-210ENST00000557431 YES1P07947 543 aa12.46□□□□□ -0.41
SLIRP-210ENST00000557431 IFI6P09912 130 aa12.46□□□□□ -0.41
SLIRP-210ENST00000557431 IGHV1-2P23083 117 aa12.46□□□□□ -0.41
SLIRP-210ENST00000557431 PRPH2P23942 346 aa12.46□□□□□ -0.41
SLIRP-210ENST00000557431 ELK4P28324 431 aa12.46□□□□□ -0.41
SLIRP-210ENST00000557431 P2RX1P51575 399 aa12.46□□□□□ -0.41
SLIRP-210ENST00000557431 TP53BP2Q13625 1128 aa12.46□□□□□ -0.41
SLIRP-210ENST00000557431 PPA1Q15181 289 aa12.46□□□□□ -0.41
SLIRP-210ENST00000557431 RNPS1Q15287 305 aaKnown RBP12.46□□□□□ -0.41
SLIRP-210ENST00000557431 PODNL1Q6PEZ8 512 aa12.46□□□□□ -0.41
SLIRP-210ENST00000557431 MISPQ8IVT2 679 aa12.46□□□□□ -0.41
SLIRP-210ENST00000557431 GPR119Q8TDV5 335 aa12.46□□□□□ -0.41
SLIRP-210ENST00000557431 ACMSDQ8TDX5 336 aa12.46□□□□□ -0.41
SLIRP-210ENST00000557431 HSD17B8Q92506 261 aa12.46□□□□□ -0.41
SLIRP-210ENST00000557431 CCT7Q99832 543 aa12.46□□□□□ -0.41
SLIRP-210ENST00000557431 BTBD2Q9BX70 525 aa12.46□□□□□ -0.41
SLIRP-210ENST00000557431 HDHD5Q9BXW7 423 aa12.46□□□□□ -0.41
SLIRP-210ENST00000557431 NGBQ9NPG2 151 aa12.46□□□□□ -0.41
SLIRP-210ENST00000557431 DCDC2Q9UHG0 476 aa12.46□□□□□ -0.41
SLIRP-210ENST00000557431 ICAM5Q9UMF0 924 aa12.46□□□□□ -0.41
SLIRP-210ENST00000557431 WBP11Q9Y2W2 641 aaKnown RBP12.46□□□□□ -0.41
SLIRP-210ENST00000557431 MXRA5Q9NR99 2828 aa12.46□□□□□ -0.42
SLIRP-210ENST00000557431 A0A096LNT2 108 aa12.45□□□□□ -0.42
SLIRP-210ENST00000557431 CENPVL1A0A0U1RR11 272 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms