RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 TCHPQ9BT92 498 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 FTHL17Q9BXU8 183 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 LHX5Q9H2C1 402 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 POLD4Q9HCU8 107 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 ABCC13Q9NSE7 274 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 ARGLU1Q9NWB6 273 aaPredicted RBP2.73□□□□□ -1.97
VRK1-207ENST00000557352 GDAP2Q9NXN4 497 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 SEPT10Q9P0V9 454 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 ZNF319Q9P2F9 582 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 UVRAGQ9P2Y5 699 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 RPS6KB2Q9UBS0 482 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 UBQLN1Q9UMX0 589 aaKnown RBP2.73□□□□□ -1.97
VRK1-207ENST00000557352 TMED7Q9Y3B3 224 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 MKI67P46013 3256 aaKnown RBP2.73□□□□□ -1.97
VRK1-207ENST00000557352 IGHV3-35A0A0C4DH35 117 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 MIF4GDA9UHW6 222 aaKnown RBP2.72□□□□□ -1.97
VRK1-207ENST00000557352 PIRO00625 290 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 DYNC1I1O14576 645 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 CTDSPLO15194 276 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 MED7O43513 233 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 CLN5O75503 358 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 PGK1P00558 417 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 CHRNA1P02708 482 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 CXCL10P02778 98 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 CALB1P05937 261 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 PLEKP08567 350 aaPredicted RBP2.72□□□□□ -1.97
VRK1-207ENST00000557352 FCGR3AP08637 254 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 H2AFZP0C0S5 128 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 C8orf89P0DMQ9 161 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 GLULP15104 373 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 TCP1P17987 556 aaKnown RBP2.72□□□□□ -1.97
VRK1-207ENST00000557352 CASQ1P31415 396 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 RFC2P35250 354 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 SLC1A1P43005 524 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 MAGEA1P43355 309 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 MAGEA9P43362 315 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 TNNT3P45378 269 aaPredicted RBP2.72□□□□□ -1.97
VRK1-207ENST00000557352 IER3P46695 156 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 ZNF133P52736 654 aaPredicted RBP2.72□□□□□ -1.97
VRK1-207ENST00000557352 MYL6P60660 151 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 YWHAHQ04917 246 aaPredicted RBP2.72□□□□□ -1.97
VRK1-207ENST00000557352 GFPT1Q06210 699 aaPredicted RBP2.72□□□□□ -1.97
VRK1-207ENST00000557352 PPP1R3AQ16821 1122 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 WHAMMP3Q1A5X7 153 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 ZNF699Q32M78 642 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 ANKRD55Q3KP44 614 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 ANKRD20A4Q4UJ75 823 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 ANKRD20A8PQ5CZ79 823 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 ANKRD20A2Q5SQ80 823 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 ANKRD20A1Q5TYW2 823 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 ANKRD20A3Q5VUR7 823 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 LYPLAL1Q5VWZ2 237 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 CXCL17Q6UXB2 119 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 H2AFVQ71UI9 128 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 KIAA1328Q86T90 577 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 TMEM86AQ8N2M4 240 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 CEP112Q8N8E3 955 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 UXS1Q8NBZ7 420 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 GDAP1Q8TB36 358 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 VN1R17PQ8TDU5 208 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 CTNNBL1Q8WYA6 563 aaPredicted RBP2.72□□□□□ -1.97
VRK1-207ENST00000557352 CCDC127Q96BQ5 260 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 FAF2Q96CS3 445 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 PKNOX2Q96KN3 472 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 NAPGQ99747 312 aaPredicted RBP2.72□□□□□ -1.97
VRK1-207ENST00000557352 AGPAT1Q99943 283 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 ATG101Q9BSB4 218 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 DESI2Q9BSY9 194 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 CARD9Q9H257 536 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 ZNF665Q9H7R5 613 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 MRPL47Q9HD33 250 aaKnown RBP2.72□□□□□ -1.97
VRK1-207ENST00000557352 RGS18Q9NS28 235 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 CISHQ9NSE2 258 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 SLCO1C1Q9NYB5 712 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 DNAJB9Q9UBS3 223 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 BARX2Q9UMQ3 279 aaPredicted RBP2.72□□□□□ -1.97
VRK1-207ENST00000557352 PIN4Q9Y237 131 aaKnown RBP2.72□□□□□ -1.97
VRK1-207ENST00000557352 ETV7Q9Y603 341 aa2.72□□□□□ -1.97
VRK1-207ENST00000557352 DENND4AQ7Z401 1863 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 ZNF106Q9H2Y7 1883 aaKnown RBP2.71□□□□□ -1.98
VRK1-207ENST00000557352 PRRC2BQ5JSZ5 2229 aaKnown RBP2.71□□□□□ -1.98
VRK1-207ENST00000557352 SMIM28A0A1B0GU29 152 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 RNF212BA8MTL3 300 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 SLC33A1O00400 549 aaPredicted RBP2.71□□□□□ -1.98
VRK1-207ENST00000557352 ST8SIA3O43173 380 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 OR6A2O95222 327 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 APBB3O95704 486 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 VDRP11473 427 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 HSD17B1P14061 328 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 WARSP23381 471 aaKnown RBP2.71□□□□□ -1.98
VRK1-207ENST00000557352 ATP5DP30049 168 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 PPP2R1BP30154 601 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 CTNNA1P35221 906 aaKnown RBP2.71□□□□□ -1.98
VRK1-207ENST00000557352 NSFP46459 744 aaKnown RBP2.71□□□□□ -1.98
VRK1-207ENST00000557352 KCNJ1P48048 391 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 NDST1P52848 882 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 SNU13P55769 128 aaKnown RBP2.71□□□□□ -1.98
VRK1-207ENST00000557352 ST8SIA6P61647 398 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 GNG11P61952 73 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 TNNC1P63316 161 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms