RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 KCNJ10P78508 379 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 RGNQ15493 299 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 CDSNQ15517 529 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 SLC25A35Q3KQZ1 300 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 PAGE3Q5JUK9 113 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 OLIG3Q7RTU3 272 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 ADGRE4PQ86SQ3 457 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 GRAMD2AQ8IUY3 354 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 CMIPQ8IY22 773 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 PEX5LQ8IYB4 626 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 UBQLNLQ8IYU4 475 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 TNIP2Q8NFZ5 429 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 GPR119Q8TDV5 335 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 TMEM234Q8WY98 164 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 SMPDL3BQ92485 455 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 WNT2BQ93097 391 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 AURKBQ96GD4 344 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-209ENST00000557342 RNF145Q96MT1 663 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 SLC38A1Q9H2H9 487 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 CACYBPQ9HB71 228 aaKnown RBP11.27□□□□□ -0.61
SLIRP-209ENST00000557342 PAQR5Q9NXK6 330 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-209ENST00000557342 KLHL14Q9P2G3 628 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 ZNF629Q9UEG4 869 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-209ENST00000557342 GMEB1Q9Y692 573 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 CENPVL1A0A0U1RR11 272 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 AGAP5A6NIR3 686 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 GJE1A6NN92 205 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 FAM90A27PA6NNH2 459 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 EVPLLA8MZ36 301 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 SHISA8B8ZZ34 492 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 SEC14L5O43304 696 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 OIP5O43482 229 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 CYP7B1O75881 506 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 TOXO94900 526 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 RCBTB2O95199 551 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 IL18BPO95998 194 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 BCHEP06276 602 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 DBIP07108 87 aaKnown RBP11.26□□□□□ -0.61
SLIRP-209ENST00000557342 SNRPB2P08579 225 aaKnown RBP11.26□□□□□ -0.61
SLIRP-209ENST00000557342 TFPTP0C1Z6 253 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 UBTFL6P0CB48 400 aaPredicted RBP11.26□□□□□ -0.61
SLIRP-209ENST00000557342 BMP2P12643 396 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 IL7RP16871 459 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 PGCP20142 388 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 CTSSP25774 331 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 PSMA4P25789 261 aaKnown RBP11.26□□□□□ -0.61
SLIRP-209ENST00000557342 COL8A1P27658 744 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 PGM1P36871 562 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 SLC6A8P48029 635 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 CCR4P51679 360 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 EEF1A1P68104 462 aaKnown RBP11.26□□□□□ -0.61
SLIRP-209ENST00000557342 SKP2Q13309 424 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 MAPK14Q16539 360 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 NDUFAF6Q330K2 333 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 PDSS1Q5T2R2 415 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 EEF1A1P5Q5VTE0 462 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 PRAMEF8Q5VWM4 474 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 PRAMEF7Q5VXH5 474 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 CGB2Q6NT52 195 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 P4HA3Q7Z4N8 544 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 METTL25Q8N6Q8 603 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 FAM71CQ8NEG0 241 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 SLC38A5Q8WUX1 472 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 WDR60Q8WVS4 1066 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 ST8SIA1Q92185 356 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 LRRC46Q96FV0 321 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 MRGPRX4Q96LA9 322 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 THUMPD3Q9BV44 507 aaKnown RBP11.26□□□□□ -0.61
SLIRP-209ENST00000557342 EXOSC3Q9NQT5 275 aaKnown RBP11.26□□□□□ -0.61
SLIRP-209ENST00000557342 SLC25A37Q9NYZ2 338 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 CLCF1Q9UBD9 225 aa11.26□□□□□ -0.61
SLIRP-209ENST00000557342 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.26□□□□□ -0.61
SLIRP-209ENST00000557342 USP9YO00507 2555 aaPredicted RBP11.26□□□□□ -0.61
SLIRP-209ENST00000557342 INTS1Q8N201 2190 aaKnown RBP11.26□□□□□ -0.61
SLIRP-209ENST00000557342 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 A0A0G2JPF8 293 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 SLC22A20A6NK97 555 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 KDM4EB2RXH2 506 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-209ENST00000557342 HNRNPCL2B2RXH8 293 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 HNRNPCL3B7ZW38 293 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 C5orf58C9J3I9 102 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 HNRNPRO43390 633 aaKnown RBP11.25□□□□□ -0.61
SLIRP-209ENST00000557342 HNRNPCL1O60812 293 aaKnown RBP11.25□□□□□ -0.61
SLIRP-209ENST00000557342 DNAJA2O60884 412 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 HNRNPCL4P0DMR1 293 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 TMIGD3P0DMS9 266 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-209ENST00000557342 PRKCAP17252 672 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 RPS4Y1P22090 263 aaKnown RBP11.25□□□□□ -0.61
SLIRP-209ENST00000557342 GRNP28799 593 aaKnown RBP11.25□□□□□ -0.61
SLIRP-209ENST00000557342 ADSLP30566 484 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-209ENST00000557342 OPRM1P35372 400 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 SUCLG1P53597 346 aaKnown RBP11.25□□□□□ -0.61
SLIRP-209ENST00000557342 CLDN20P56880 219 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 FOXF1Q12946 379 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 QPRTQ15274 297 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 MAPRE2Q15555 327 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 SGCBQ16585 318 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 ZSWIM7Q19AV6 140 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 SLC25A53Q5H9E4 307 aa11.25□□□□□ -0.61
SLIRP-209ENST00000557342 HIST2H2BCQ6DN03 193 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms