RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 TMIGD3P0DMS9 266 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-207ENST00000556831 FCGR2AP12318 317 aa12.73□□□□□ -0.37
SLIRP-207ENST00000556831 OPRM1P35372 400 aa12.73□□□□□ -0.37
SLIRP-207ENST00000556831 ADH7P40394 386 aa12.73□□□□□ -0.37
SLIRP-207ENST00000556831 CLDN18P56856 261 aa12.73□□□□□ -0.37
SLIRP-207ENST00000556831 B3GALT5-AS1P59052 145 aa12.73□□□□□ -0.37
SLIRP-207ENST00000556831 ZNF141Q15928 474 aa12.73□□□□□ -0.37
SLIRP-207ENST00000556831 PLPPR5Q32ZL2 321 aa12.73□□□□□ -0.37
SLIRP-207ENST00000556831 AGKQ53H12 422 aa12.73□□□□□ -0.37
SLIRP-207ENST00000556831 OR2A2Q6IF42 318 aa12.73□□□□□ -0.37
SLIRP-207ENST00000556831 GTPBP8Q8N3Z3 284 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-207ENST00000556831 TNIP2Q8NFZ5 429 aa12.73□□□□□ -0.37
SLIRP-207ENST00000556831 MBD3L2Q8NHZ7 208 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-207ENST00000556831 WNT2BQ93097 391 aa12.73□□□□□ -0.37
SLIRP-207ENST00000556831 RNF145Q96MT1 663 aa12.73□□□□□ -0.37
SLIRP-207ENST00000556831 TRNT1Q96Q11 434 aaKnown RBP12.73□□□□□ -0.37
SLIRP-207ENST00000556831 PRRG4Q9BZD6 226 aa12.73□□□□□ -0.37
SLIRP-207ENST00000556831 TPT1P8Q9HAU6 139 aa12.73□□□□□ -0.37
SLIRP-207ENST00000556831 SLC24A3Q9HC58 644 aa12.73□□□□□ -0.37
SLIRP-207ENST00000556831 PAQR5Q9NXK6 330 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-207ENST00000556831 ZNF629Q9UEG4 869 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-207ENST00000556831 ZNF337Q9Y3M9 751 aa12.73□□□□□ -0.37
SLIRP-207ENST00000556831 GPC6Q9Y625 555 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-207ENST00000556831 HIVEP1P15822 2718 aa12.73□□□□□ -0.37
SLIRP-207ENST00000556831 PCNX3Q9H6A9 2034 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 DCHS2Q6V1P9 2916 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 C7orf72A4D263 438 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 SHISA8B8ZZ34 492 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 EEF1E1-BLOC1S5C9J1V9 151 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 EIF1AYO14602 144 aaKnown RBP12.72□□□□□ -0.37
SLIRP-207ENST00000556831 ANGPT2O15123 496 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 EEF1E1O43324 174 aaKnown RBP12.72□□□□□ -0.37
SLIRP-207ENST00000556831 FCMRO60667 390 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 GUSBP08236 651 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 SNRPB2P08579 225 aaKnown RBP12.72□□□□□ -0.37
SLIRP-207ENST00000556831 UBTFL6P0CB48 400 aaPredicted RBP12.72□□□□□ -0.37
SLIRP-207ENST00000556831 PRF1P14222 555 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 UQCRBP14927 111 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 PPIBP23284 216 aaKnown RBP12.72□□□□□ -0.37
SLIRP-207ENST00000556831 CTSSP25774 331 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 ELK4P28324 431 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 CRISP3P54108 245 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 DSTNP60981 165 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 EEF1A1P68104 462 aaKnown RBP12.72□□□□□ -0.37
SLIRP-207ENST00000556831 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.72□□□□□ -0.37
SLIRP-207ENST00000556831 EEF1A1P5Q5VTE0 462 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 TYW3Q6IPR3 259 aaKnown RBP12.72□□□□□ -0.37
SLIRP-207ENST00000556831 SLC2A7Q6PXP3 512 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 BLOC1S3Q6QNY0 202 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 PLXDC2Q6UX71 529 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 MEX3BQ6ZN04 569 aaKnown RBP12.72□□□□□ -0.37
SLIRP-207ENST00000556831 OR5W2Q8NH69 310 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 ZNF563Q8TA94 476 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 ZFP90Q8TF47 636 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 TMEM234Q8WY98 164 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 PINK1Q9BXM7 581 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 UCK2Q9BZX2 261 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.72□□□□□ -0.37
SLIRP-207ENST00000556831 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.72□□□□□ -0.37
SLIRP-207ENST00000556831 MCTS1Q9ULC4 181 aaKnown RBP12.72□□□□□ -0.37
SLIRP-207ENST00000556831 CORO2BQ9UQ03 480 aa12.72□□□□□ -0.37
SLIRP-207ENST00000556831 A0A096LPI6 279 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 C5orf58C9J3I9 102 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 NPIPB9F8W1W9 429 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 UGT2B17O75795 530 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 SYNGR4O95473 234 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 BCHEP06276 602 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 IL7RP16871 459 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 PGCP20142 388 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 ADH6P28332 368 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 CEACAM8P31997 349 aaPredicted RBP12.71□□□□□ -0.37
SLIRP-207ENST00000556831 EIF1AXP47813 144 aaKnown RBP12.71□□□□□ -0.37
SLIRP-207ENST00000556831 CPA2P48052 419 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 ASCL1P50553 236 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 GNGT1P63211 74 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 FOXF1Q12946 379 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 NDUFAF6Q330K2 333 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 CBLN3Q6UW01 205 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 FRRS1Q6ZNA5 592 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 LRRC74BQ6ZQY2 392 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 SEM1Q6ZVN7 128 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 GDF7Q7Z4P5 450 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 LSRQ86X29 649 aaPredicted RBP12.71□□□□□ -0.37
SLIRP-207ENST00000556831 PEX5LQ8IYB4 626 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 C9orf106Q8NAJ2 232 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 WDR60Q8WVS4 1066 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 GTF2H4Q92759 462 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 PMM1Q92871 262 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 REXO5Q96IC2 774 aaKnown RBP12.71□□□□□ -0.37
SLIRP-207ENST00000556831 SFXN3Q9BWM7 321 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 TMEM120AQ9BXJ8 343 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 LAT2Q9GZY6 243 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 ARMC7Q9H6L4 198 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 TMEM185BQ9H7F4 350 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 TIGARQ9NQ88 270 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 FGFR1OP2Q9NVK5 253 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 L3MBTL1Q9Y468 752 aa12.71□□□□□ -0.37
SLIRP-207ENST00000556831 EVPLLA8MZ36 301 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 CLIC1O00299 241 aa12.7□□□□□ -0.38
SLIRP-207ENST00000556831 PLGP00747 810 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms