RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 SLC22A10Q63ZE4 541 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 C8orf44Q96CB5 159 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 NEDD4LQ96PU5 975 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 ZNF69Q9UC07 566 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 M0R129 80 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 MRPL33O75394 65 aaKnown RBP16.18■□□□□ 0.18
PTPN21-208ENST00000556564 SLC35E2P0CK97 266 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 HOXC8P31273 242 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 CYB561P49447 251 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 CPOQ8IVL8 374 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 TEX101Q9BY14 249 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 CALHM2Q9HA72 323 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 ZNF337Q9Y3M9 751 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 ARNTLO00327 626 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 C6orf141Q5SZD1 244 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 SLC48A1Q6P1K1 146 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 DEFB124Q8NES8 71 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 OR5M1Q8NGP8 315 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 GTF2H4Q92759 462 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 AMDHD1Q96NU7 426 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 THSD1Q9NS62 852 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 RAD51DO75771 328 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 RSU1Q15404 277 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 ANKK1Q8NFD2 765 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 SLC46A1Q96NT5 459 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 PLEK2Q9NYT0 353 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 SPEF1Q9Y4P9 236 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 SYT7O43581 403 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 CAPZBP47756 277 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 CNPY1Q3B7I2 92 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 ZNF585AQ6P3V2 769 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 PODNL1Q6PEZ8 512 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 CXorf36Q9H7Y0 433 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 POLHQ9Y253 713 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 FAM166BA8MTA8 275 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 PLPP1O14494 284 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 CSO75390 466 aaKnown RBP16.17■□□□□ 0.18
PTPN21-208ENST00000556564 GRK5P34947 590 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 POLR2HP52434 150 aaKnown RBP16.17■□□□□ 0.18
PTPN21-208ENST00000556564 TRAM1Q15629 374 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 C22orf42Q6IC83 251 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 VHLLQ6RSH7 139 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 TMED4Q7Z7H5 227 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 PAQR7Q86WK9 346 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 FOXRED2Q8IWF2 684 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 TRMT10AQ8TBZ6 339 aaKnown RBP16.17■□□□□ 0.18
PTPN21-208ENST00000556564 MYEF2Q9P2K5 600 aaKnown RBP16.17■□□□□ 0.18
PTPN21-208ENST00000556564 RFPL3O75679 317 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 DPP4P27487 766 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 RAB2AP61019 212 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 ROR2Q01974 943 aaKnown RBP16.17■□□□□ 0.18
PTPN21-208ENST00000556564 SQSTM1Q13501 440 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 SWI5Q1ZZU3 235 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 TMPRSS11EQ9UL52 423 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 SERINC4A6NH21 518 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 TARM1B6A8C7 271 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 KLRC4-KLRK1H3BQV0 150 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 L7N2F9 121 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 TACR3P29371 465 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 VAMP2P63027 116 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 TP53I3Q53FA7 332 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 PLCZ1Q86YW0 608 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 SLC7A6OSQ96CW6 309 aaPredicted RBP16.17■□□□□ 0.18
PTPN21-208ENST00000556564 SEC14L4Q9UDX3 406 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 F13BP05160 661 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 GYPBP06028 91 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 LCKP06239 509 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 SOX3P41225 446 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 TNFAIP8L3Q5GJ75 292 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 BEND4Q6ZU67 534 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 OR5AK2Q8NH90 309 aa16.17■□□□□ 0.18
PTPN21-208ENST00000556564 EEF1E1-BLOC1S5C9J1V9 151 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 EEF1E1O43324 174 aaKnown RBP16.16■□□□□ 0.18
PTPN21-208ENST00000556564 CISD3P0C7P0 127 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 CLDN17P56750 224 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 CGB2Q6NT52 195 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 ABHD5Q8WTS1 349 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 ZNF578Q96N58 590 aaPredicted RBP16.16■□□□□ 0.18
PTPN21-208ENST00000556564 CCDC115Q96NT0 180 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 OR52A5Q9H2C5 316 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 SPTY2D1-AS1A0A0U1RR47 76 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 C5orf67F2Z3F1 127 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 TMEM215Q68D42 235 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 SSX6Q7RTT6 188 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 DTWD2Q8NBA8 298 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 BAHD1Q8TBE0 780 aaPredicted RBP16.16■□□□□ 0.18
PTPN21-208ENST00000556564 CHTF18Q8WVB6 975 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 TRPV4Q9HBA0 871 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 TUBA8Q9NY65 449 aaPredicted RBP16.16■□□□□ 0.18
PTPN21-208ENST00000556564 TEX13DA0A0J9YY54 714 aaPredicted RBP16.16■□□□□ 0.18
PTPN21-208ENST00000556564 TVP23AA6NH52 213 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 ORC5O43913 435 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 CHRFAM7AQ494W8 412 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 OR7G1Q8NGA0 311 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 MS4A6EQ96DS6 147 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 SCGB3A2Q96PL1 93 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 SLC5A7Q9GZV3 580 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 MEMO1Q9Y316 297 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 MT-ND2P03891 347 aa16.16■□□□□ 0.18
PTPN21-208ENST00000556564 FRKP42685 505 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms