RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 DTD1Q8TEA8 209 aa8□□□□□ -1.13
MARK3-210ENST00000556463 C2orf15Q8WU43 125 aaKnown RBP8□□□□□ -1.13
MARK3-210ENST00000556463 SLC38A5Q8WUX1 472 aa8□□□□□ -1.13
MARK3-210ENST00000556463 LRR1Q96L50 414 aa8□□□□□ -1.13
MARK3-210ENST00000556463 OR2M2Q96R28 347 aa8□□□□□ -1.13
MARK3-210ENST00000556463 TIMP4Q99727 224 aa8□□□□□ -1.13
MARK3-210ENST00000556463 POLR2J3Q9H1A7 115 aaKnown RBP8□□□□□ -1.13
MARK3-210ENST00000556463 MVB12BQ9H7P6 319 aa8□□□□□ -1.13
MARK3-210ENST00000556463 KCNK12Q9HB15 430 aa8□□□□□ -1.13
MARK3-210ENST00000556463 ASF1BQ9NVP2 202 aa8□□□□□ -1.13
MARK3-210ENST00000556463 LYARQ9NX58 379 aaKnown RBP8□□□□□ -1.13
MARK3-210ENST00000556463 COA4Q9NYJ1 87 aa8□□□□□ -1.13
MARK3-210ENST00000556463 NLGN3Q9NZ94 848 aa8□□□□□ -1.13
MARK3-210ENST00000556463 GULP1Q9UBP9 304 aa8□□□□□ -1.13
MARK3-210ENST00000556463 FBXW2Q9UKT8 454 aa8□□□□□ -1.13
MARK3-210ENST00000556463 CCDC88CQ9P219 2028 aa8□□□□□ -1.13
MARK3-210ENST00000556463 TRBV23OR9-2A0A075B6M9 112 aa8□□□□□ -1.13
MARK3-210ENST00000556463 ANKDD1BA6NHY2 528 aa8□□□□□ -1.13
MARK3-210ENST00000556463 NEDD8-MDP1E9PL57 170 aa8□□□□□ -1.13
MARK3-210ENST00000556463 RFXAPO00287 272 aa8□□□□□ -1.13
MARK3-210ENST00000556463 AGPAT2O15120 278 aa8□□□□□ -1.13
MARK3-210ENST00000556463 TLX2O43763 284 aaPredicted RBP8□□□□□ -1.13
MARK3-210ENST00000556463 MT-ND4P03905 459 aa8□□□□□ -1.13
MARK3-210ENST00000556463 RB1P06400 928 aa8□□□□□ -1.13
MARK3-210ENST00000556463 CORO1AP31146 461 aaKnown RBP8□□□□□ -1.13
MARK3-210ENST00000556463 NDUFA9Q16795 377 aa8□□□□□ -1.13
MARK3-210ENST00000556463 ACER2Q5QJU3 275 aa8□□□□□ -1.13
MARK3-210ENST00000556463 DCST1Q5T197 706 aa8□□□□□ -1.13
MARK3-210ENST00000556463 RAET1GQ6H3X3 334 aa8□□□□□ -1.13
MARK3-210ENST00000556463 PRSS58Q8IYP2 241 aa8□□□□□ -1.13
MARK3-210ENST00000556463 TOMM5Q8N4H5 51 aa8□□□□□ -1.13
MARK3-210ENST00000556463 ZNF354BQ96LW1 612 aa8□□□□□ -1.13
MARK3-210ENST00000556463 TEFMQ96QE5 360 aaKnown RBP8□□□□□ -1.13
MARK3-210ENST00000556463 PKP4Q99569 1192 aa8□□□□□ -1.13
MARK3-210ENST00000556463 ATG10Q9H0Y0 220 aa8□□□□□ -1.13
MARK3-210ENST00000556463 GPN3Q9UHW5 284 aaPredicted RBP8□□□□□ -1.13
MARK3-210ENST00000556463 SLC6A5Q9Y345 797 aa8□□□□□ -1.13
MARK3-210ENST00000556463 CNTRLQ7Z7A1 2325 aa8□□□□□ -1.13
MARK3-210ENST00000556463 K7ERQ8 282 aa8□□□□□ -1.13
MARK3-210ENST00000556463 DNASE2O00115 360 aaPredicted RBP8□□□□□ -1.13
MARK3-210ENST00000556463 PQBP1O60828 265 aaKnown RBP8□□□□□ -1.13
MARK3-210ENST00000556463 B4GALT2O60909 372 aa8□□□□□ -1.13
MARK3-210ENST00000556463 LATS1O95835 1130 aa8□□□□□ -1.13
MARK3-210ENST00000556463 EPPINO95925 133 aa8□□□□□ -1.13
MARK3-210ENST00000556463 EOMESO95936 686 aa8□□□□□ -1.13
MARK3-210ENST00000556463 H1F0P07305 194 aaKnown RBP8□□□□□ -1.13
MARK3-210ENST00000556463 HOXB1P14653 301 aaPredicted RBP8□□□□□ -1.13
MARK3-210ENST00000556463 UQCRC2P22695 453 aa8□□□□□ -1.13
MARK3-210ENST00000556463 XPAP23025 273 aaPredicted RBP8□□□□□ -1.13
MARK3-210ENST00000556463 MMP11P24347 488 aa8□□□□□ -1.13
MARK3-210ENST00000556463 CHI3L1P36222 383 aaPredicted RBP8□□□□□ -1.13
MARK3-210ENST00000556463 BDH1Q02338 343 aa8□□□□□ -1.13
MARK3-210ENST00000556463 STX4Q12846 297 aa8□□□□□ -1.13
MARK3-210ENST00000556463 ILF3Q12906 894 aaKnown RBP eCLIP8□□□□□ -1.13
MARK3-210ENST00000556463 DUSP4Q13115 394 aa8□□□□□ -1.13
MARK3-210ENST00000556463 ODF4Q2M2E3 257 aa8□□□□□ -1.13
MARK3-210ENST00000556463 NCMAPQ5T1S8 102 aa8□□□□□ -1.13
MARK3-210ENST00000556463 CLEC9AQ6UXN8 241 aa8□□□□□ -1.13
MARK3-210ENST00000556463 MAMDC2Q7Z304 686 aaPredicted RBP8□□□□□ -1.13
MARK3-210ENST00000556463 OAFQ86UD1 273 aa8□□□□□ -1.13
MARK3-210ENST00000556463 MARCH9Q86YJ5 346 aa8□□□□□ -1.13
MARK3-210ENST00000556463 CELF5Q8N6W0 485 aaKnown RBP8□□□□□ -1.13
MARK3-210ENST00000556463 C16orf78Q8WTQ4 265 aa8□□□□□ -1.13
MARK3-210ENST00000556463 CCDC74AQ96AQ1 378 aa8□□□□□ -1.13
MARK3-210ENST00000556463 SLC38A2Q96QD8 506 aa8□□□□□ -1.13
MARK3-210ENST00000556463 ANKRD19PQ9H560 264 aa8□□□□□ -1.13
MARK3-210ENST00000556463 PTGFRNQ9P2B2 879 aa8□□□□□ -1.13
MARK3-210ENST00000556463 STOX2Q9P2F5 926 aaPredicted RBP8□□□□□ -1.13
MARK3-210ENST00000556463 KIF25Q9UIL4 384 aa8□□□□□ -1.13
MARK3-210ENST00000556463 OR6C68A6NDL8 312 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 CXorf65A6NEN9 183 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 GABRPO00591 440 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 TERTO14746 1132 aaKnown RBP7.99□□□□□ -1.13
MARK3-210ENST00000556463 RAD1O60671 282 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 NR2F6P10588 404 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 NME1P15531 152 aaKnown RBP7.99□□□□□ -1.13
MARK3-210ENST00000556463 RPL3P39023 403 aaKnown RBP7.99□□□□□ -1.13
MARK3-210ENST00000556463 PNLIPRP1P54315 467 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 CTXN3Q4LDR2 81 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 NHLRC3Q5JS37 347 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 TFAP2EQ6VUC0 442 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 LINC00471Q8N535 108 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 SAMD12Q8N8I0 201 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 OR5T2Q8NGG2 359 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 CMTM3Q96MX0 182 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 GAL3ST4Q96RP7 486 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 SEMA4CQ9C0C4 833 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 SGK2Q9HBY8 427 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 MARK1Q9P0L2 795 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 FAM86C2PA6NEL3 165 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 MGAT4DA6NG13 374 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 CD8B2A6NJW9 211 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 D6RAR5 112 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 RTCAO00442 366 aaKnown RBP7.99□□□□□ -1.13
MARK3-210ENST00000556463 FBXO24O75426 580 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 EFEMP2O95967 443 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 H2AFB2P0C5Z0 115 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 CD8BP10966 210 aa7.99□□□□□ -1.13
MARK3-210ENST00000556463 ATP1B2P14415 290 aaPredicted RBP7.99□□□□□ -1.13
MARK3-210ENST00000556463 S100A2P29034 98 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms