RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 RASA2Q15283 850 aa12.27□□□□□ -0.45
ACTN1-219ENST00000556432 SPDYAQ5MJ70 313 aa12.27□□□□□ -0.45
ACTN1-219ENST00000556432 MISPQ8IVT2 679 aa12.27□□□□□ -0.45
ACTN1-219ENST00000556432 ZMYND19Q96E35 227 aaPredicted RBP12.27□□□□□ -0.45
ACTN1-219ENST00000556432 ELP4Q96EB1 424 aa12.27□□□□□ -0.45
ACTN1-219ENST00000556432 AMDHD1Q96NU7 426 aa12.27□□□□□ -0.45
ACTN1-219ENST00000556432 INPP5KQ9BT40 448 aa12.27□□□□□ -0.45
ACTN1-219ENST00000556432 C1QTNF6Q9BXI9 259 aa12.27□□□□□ -0.45
ACTN1-219ENST00000556432 OCEL1Q9H607 264 aa12.27□□□□□ -0.45
ACTN1-219ENST00000556432 GRID1Q9ULK0 1009 aa12.27□□□□□ -0.45
ACTN1-219ENST00000556432 NDUFS8O00217 210 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 RGS14O43566 566 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 IGHV3-9P01782 118 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 LINGO3P0C6S8 592 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 COX5AP20674 150 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 EDNRAP25101 427 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 GPC1P35052 558 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 PAFAH1B1P43034 410 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 PRKAG1P54619 331 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 PLTPP55058 493 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 ZNF763Q0D2J5 394 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 PRSS53Q2L4Q9 553 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 ARL13AQ5H913 290 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-219ENST00000556432 CREG2Q8IUH2 290 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 ZNF433Q8N7K0 673 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-219ENST00000556432 C3orf56Q8N813 242 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 FBXO27Q8NI29 283 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.26□□□□□ -0.45
ACTN1-219ENST00000556432 METTL6Q8TCB7 284 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 FBXO17Q96EF6 278 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 FOXN4Q96NZ1 517 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 ZNF300Q96RE9 604 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-219ENST00000556432 PSD2Q9BQI7 771 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 ERP44Q9BS26 406 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 COQ10BQ9H8M1 238 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 FKRPQ9H9S5 495 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 GRPEL1Q9HAV7 217 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 BCO1Q9HAY6 547 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 UBQLN4Q9NRR5 601 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 ZNF225Q9UK10 706 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 DYSFO75923 2080 aa12.26□□□□□ -0.45
ACTN1-219ENST00000556432 A0A1W2PNR3 127 aa12.25□□□□□ -0.45
ACTN1-219ENST00000556432 VWC2LB2RUY7 222 aa12.25□□□□□ -0.45
ACTN1-219ENST00000556432 PGM3O95394 542 aa12.25□□□□□ -0.45
ACTN1-219ENST00000556432 PRPS2P11908 318 aa12.25□□□□□ -0.45
ACTN1-219ENST00000556432 GSTM5P46439 218 aa12.25□□□□□ -0.45
ACTN1-219ENST00000556432 HTR6P50406 440 aa12.25□□□□□ -0.45
ACTN1-219ENST00000556432 RNF144AP50876 292 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-219ENST00000556432 CLCQ05315 142 aa12.25□□□□□ -0.45
ACTN1-219ENST00000556432 MLC1Q15049 377 aa12.25□□□□□ -0.45
ACTN1-219ENST00000556432 CD226Q15762 336 aa12.25□□□□□ -0.45
ACTN1-219ENST00000556432 TSNAXIP1Q2TAA8 658 aa12.25□□□□□ -0.45
ACTN1-219ENST00000556432 FAM174BQ3ZCQ3 159 aa12.25□□□□□ -0.45
ACTN1-219ENST00000556432 TEX35Q5T0J7 233 aa12.25□□□□□ -0.45
ACTN1-219ENST00000556432 GPRIN3Q6ZVF9 776 aa12.25□□□□□ -0.45
ACTN1-219ENST00000556432 GALNT5Q7Z7M9 940 aa12.25□□□□□ -0.45
ACTN1-219ENST00000556432 ZAR1Q86SH2 424 aa12.25□□□□□ -0.45
ACTN1-219ENST00000556432 OR6Y1Q8NGX8 325 aa12.25□□□□□ -0.45
ACTN1-219ENST00000556432 SGMS2Q8NHU3 365 aa12.25□□□□□ -0.45
ACTN1-219ENST00000556432 PHOSPHO1Q8TCT1 267 aa12.25□□□□□ -0.45
ACTN1-219ENST00000556432 CHMP6Q96FZ7 201 aa12.25□□□□□ -0.45
ACTN1-219ENST00000556432 NTMQ9P121 344 aa12.25□□□□□ -0.45
ACTN1-219ENST00000556432 TRAF6Q9Y4K3 522 aa12.25□□□□□ -0.45
ACTN1-219ENST00000556432 FAM187AA6NFU0 413 aa12.24□□□□□ -0.45
ACTN1-219ENST00000556432 A8MT66 165 aa12.24□□□□□ -0.45
ACTN1-219ENST00000556432 KIF2AO00139 706 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-219ENST00000556432 ZSCAN12O43309 604 aa12.24□□□□□ -0.45
ACTN1-219ENST00000556432 EFNA2O43921 213 aa12.24□□□□□ -0.45
ACTN1-219ENST00000556432 KCNK2O95069 426 aa12.24□□□□□ -0.45
ACTN1-219ENST00000556432 NKX2-2O95096 273 aa12.24□□□□□ -0.45
ACTN1-219ENST00000556432 ZNF23P17027 643 aa12.24□□□□□ -0.45
ACTN1-219ENST00000556432 EGR1P18146 543 aa12.24□□□□□ -0.45
ACTN1-219ENST00000556432 APOBEC3AP31941 199 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-219ENST00000556432 HSD17B3P37058 310 aa12.24□□□□□ -0.45
ACTN1-219ENST00000556432 RAC3P60763 192 aa12.24□□□□□ -0.45
ACTN1-219ENST00000556432 ZNF117Q03924 483 aa12.24□□□□□ -0.45
ACTN1-219ENST00000556432 RINLQ6ZS11 566 aa12.24□□□□□ -0.45
ACTN1-219ENST00000556432 ZNF551Q7Z340 670 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-219ENST00000556432 SLC46A3Q7Z3Q1 461 aa12.24□□□□□ -0.45
ACTN1-219ENST00000556432 COX18Q8N8Q8 333 aa12.24□□□□□ -0.45
ACTN1-219ENST00000556432 CDRT4Q8N9R6 151 aa12.24□□□□□ -0.45
ACTN1-219ENST00000556432 JADE3Q92613 823 aa12.24□□□□□ -0.45
ACTN1-219ENST00000556432 OTUB1Q96FW1 271 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-219ENST00000556432 SORCS2Q96PQ0 1159 aa12.24□□□□□ -0.45
ACTN1-219ENST00000556432 VRK1Q99986 396 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-219ENST00000556432 MRPL57Q9BQC6 102 aaKnown RBP12.24□□□□□ -0.45
ACTN1-219ENST00000556432 BPESC1Q9GZL8 116 aa12.24□□□□□ -0.45
ACTN1-219ENST00000556432 MRPL46Q9H2W6 279 aaKnown RBP12.24□□□□□ -0.45
ACTN1-219ENST00000556432 GRHL1Q9NZI5 618 aa12.24□□□□□ -0.45
ACTN1-219ENST00000556432 TMEFF2Q9UIK5 374 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-219ENST00000556432 ING1Q9UK53 422 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-219ENST00000556432 SLC25A15Q9Y619 301 aa12.24□□□□□ -0.45
ACTN1-219ENST00000556432 GPC6Q9Y625 555 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-219ENST00000556432 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.24□□□□□ -0.45
ACTN1-219ENST00000556432 LOC390937A0A1W2PQ73 354 aa12.23□□□□□ -0.45
ACTN1-219ENST00000556432 LRP5LA4QPB2 252 aa12.23□□□□□ -0.45
ACTN1-219ENST00000556432 SUPT7LO94864 414 aa12.23□□□□□ -0.45
ACTN1-219ENST00000556432 CREB1P16220 341 aa12.23□□□□□ -0.45
ACTN1-219ENST00000556432 SNRPD2P62316 118 aaKnown RBP12.23□□□□□ -0.45
ACTN1-219ENST00000556432 PHC1P78364 1004 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms