RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 EIF4E2O60573 245 aaKnown RBP8.72□□□□□ -1.01
SRP54-210ENST00000556380 WDR1O75083 606 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 NTN1O95631 604 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 IGHA1P01876 353 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 LINGO3P0C6S8 592 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 GLI4P10075 376 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 NR2F1P10589 423 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 HPGDP15428 266 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 ZNF708P17019 499 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 PTGER4P35408 488 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 PGM1P36871 562 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 CRATP43155 626 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 STARP49675 285 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 PER3P56645 1201 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 CLDN18P56856 261 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 DSTNP60981 165 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 FADDQ13158 208 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 SKP2Q13309 424 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 FGFBP1Q14512 234 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 ADRM1Q16186 407 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 PLPPR5Q32ZL2 321 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 NDUFAF6Q330K2 333 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 GPAT3Q53EU6 434 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 COQ5Q5HYK3 327 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 C1orf185Q5T7R7 199 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 ZNF585AQ6P3V2 769 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 MTFR2Q6P444 385 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 RPTNQ6XPR3 784 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 SPATA21Q7Z572 469 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 ADGRE4PQ86SQ3 457 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 IFNEQ86WN2 208 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 GTPBP8Q8N3Z3 284 aaPredicted RBP8.72□□□□□ -1.01
SRP54-210ENST00000556380 PLPP7Q8NBV4 271 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 OR5M1Q8NGP8 315 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 B4GALNT2Q8NHY0 566 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 POC1BQ8TC44 478 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 ZPLD1Q8TCW7 415 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 GPR119Q8TDV5 335 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 DTNBP1Q96EV8 351 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 SH3YL1Q96HL8 342 aaPredicted RBP8.72□□□□□ -1.01
SRP54-210ENST00000556380 SFXN2Q96NB2 322 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 ANKRD27Q96NW4 1050 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 UCN2Q96RP3 112 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 CGREF1Q99674 301 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 TREX2Q9BQ50 279 aaPredicted RBP8.72□□□□□ -1.01
SRP54-210ENST00000556380 TTYH2Q9BSA4 534 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 LAT2Q9GZY6 243 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 QRSL1Q9H0R6 528 aaKnown RBP8.72□□□□□ -1.01
SRP54-210ENST00000556380 MYLK2Q9H1R3 596 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 PTGES2Q9H7Z7 377 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 BCL2L10Q9HD36 194 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 A4GALTQ9NPC4 353 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 THUMPD1Q9NXG2 353 aaKnown RBP8.72□□□□□ -1.01
SRP54-210ENST00000556380 SUCOQ9UBS9 1254 aaKnown RBP8.72□□□□□ -1.01
SRP54-210ENST00000556380 DKKL1Q9UK85 242 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 RPH3AQ9Y2J0 694 aaPredicted RBP8.72□□□□□ -1.01
SRP54-210ENST00000556380 ZNF337Q9Y3M9 751 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 L3MBTL1Q9Y468 752 aa8.72□□□□□ -1.01
SRP54-210ENST00000556380 NCOA6Q14686 2063 aaPredicted RBP8.72□□□□□ -1.01
SRP54-210ENST00000556380 CRYBG3Q68DQ2 2970 aa8.71□□□□□ -1.01
SRP54-210ENST00000556380 CLDN24A6NM45 220 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 SHISA8B8ZZ34 492 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 LINC01387J3KSC0 135 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 FXYD1O00168 92 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 GTPBP1O00178 669 aaKnown RBP8.71□□□□□ -1.02
SRP54-210ENST00000556380 ANGPT2O15123 496 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 ZNF264O43296 627 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 EFNA2O43921 213 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 GMFGO60234 142 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 CLDN1O95832 211 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 EPPINO95925 133 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 UBL4AP11441 157 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 ESRRAP11474 423 aaPredicted RBP8.71□□□□□ -1.02
SRP54-210ENST00000556380 GABRA1P14867 456 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 ZNF17P17021 662 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 AGAP20933 346 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 TCEA1P23193 301 aaKnown RBP8.71□□□□□ -1.02
SRP54-210ENST00000556380 PPIBP23284 216 aaKnown RBP8.71□□□□□ -1.02
SRP54-210ENST00000556380 P2RX1P51575 399 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 SUMO3P55854 103 aaPredicted RBP8.71□□□□□ -1.02
SRP54-210ENST00000556380 DLX5P56178 289 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 NUP107P57740 925 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 GNGT1P63211 74 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 KCNJ10P78508 379 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 PMPCAQ10713 525 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 SELPLGQ14242 412 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 CDSNQ15517 529 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 TOMM34Q15785 309 aaPredicted RBP8.71□□□□□ -1.02
SRP54-210ENST00000556380 ACSF3Q4G176 576 aaPredicted RBP8.71□□□□□ -1.02
SRP54-210ENST00000556380 SLC25A53Q5H9E4 307 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 PRAMEF8Q5VWM4 474 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 PRAMEF7Q5VXH5 474 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 TMEM211Q6ICI0 200 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 AAGABQ6PD74 315 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 EIF3MQ7L2H7 374 aaKnown RBP8.71□□□□□ -1.02
SRP54-210ENST00000556380 PIGWQ7Z7B1 504 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 HMGN2P46Q86SG4 172 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 DHDDSQ86SQ9 333 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 TREML1Q86YW5 311 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 PM20D2Q8IYS1 436 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms