RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 GDAP1Q8TB36 358 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 GRK7Q8WTQ7 553 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 RAPGEF5Q92565 580 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 KIFAP3Q92845 792 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 SGF29Q96ES7 293 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 SNF8Q96H20 258 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 C7orf34Q96L11 122 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 TMEM237Q96Q45 408 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 PLIN2Q99541 437 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 TXN2Q99757 166 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 LLPHQ9BRT6 129 aaKnown RBP3.68□□□□□ -1.82
PRPF39-209ENST00000556353 ACAT2Q9BWD1 397 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 ACPTQ9BZG2 426 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 OR10A4Q9H209 315 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 C1orf21Q9H246 121 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 MMADHCQ9H3L0 296 aaPredicted RBP3.68□□□□□ -1.82
PRPF39-209ENST00000556353 TAS2R3Q9NYW6 316 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 EMC3Q9P0I2 261 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 PLXNA2O75051 1894 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 HECTD1Q9ULT8 2610 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 MYLKQ15746 1914 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 PTPRJQ12913 1337 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 LRRK2Q5S007 2527 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 TRAV18A0A075B6X5 111 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 KRT87PA6NCN2 255 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 GOLGA6L10A6NI86 522 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 GOLGA8SH3BPF8 625 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 K7EPI3 171 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 K7ERI5 159 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 NDUFAB1O14561 156 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 TRDMT1O14717 391 aaKnown RBP3.67□□□□□ -1.82
PRPF39-209ENST00000556353 FMO6PO60774 539 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 ECI2O75521 394 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 TOM1L1O75674 476 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 ZNF189O75820 626 aaPredicted RBP3.67□□□□□ -1.82
PRPF39-209ENST00000556353 LY6G6DO95868 133 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 PIGRP01833 764 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 MT-ND2P03891 347 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 QDPRP09417 244 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 HPGDP15428 266 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 GOT1P17174 413 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 NMT1P30419 496 aaKnown RBP3.67□□□□□ -1.82
PRPF39-209ENST00000556353 MATKP42679 507 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 RGS7P49802 495 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 ARPP19P56211 112 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 DSTNP60981 165 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 SSTP61278 116 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 RPP38P78345 283 aaKnown RBP3.67□□□□□ -1.82
PRPF39-209ENST00000556353 IL10RBQ08334 325 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 NCBP1Q09161 790 aaKnown RBP3.67□□□□□ -1.82
PRPF39-209ENST00000556353 SRSF5Q13243 272 aaKnown RBP3.67□□□□□ -1.82
PRPF39-209ENST00000556353 SNX1Q13596 522 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 RFTN1Q14699 578 aaPredicted RBP3.67□□□□□ -1.82
PRPF39-209ENST00000556353 KARSQ15046 597 aaKnown RBP3.67□□□□□ -1.82
PRPF39-209ENST00000556353 ZNF528Q3MIS6 628 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 FAM174BQ3ZCQ3 159 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 NEK5Q6P3R8 708 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 IYDQ6PHW0 289 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 COX8CQ7Z4L0 72 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 NRARPQ7Z6K4 114 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 HOOK3Q86VS8 718 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 WDR49Q8IV35 697 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 ZC3H3Q8IXZ2 948 aaKnown RBP3.67□□□□□ -1.82
PRPF39-209ENST00000556353 FAM9CQ8IZT9 166 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 RNF10Q8N5U6 811 aaKnown RBP3.67□□□□□ -1.82
PRPF39-209ENST00000556353 TMCO5AQ8N6Q1 288 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 LILRB4Q8NHJ6 448 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 FAM81AQ8TBF8 368 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 ELSPBP1Q96BH3 223 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 PGAP3Q96FM1 320 aaPredicted RBP3.67□□□□□ -1.82
PRPF39-209ENST00000556353 CABS1Q96KC9 395 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 IFT74Q96LB3 600 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 RUNDC3BQ96NL0 473 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 PCDHB18PQ96TA0 734 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 ATP6V0BQ99437 205 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 SP140LQ9H930 580 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 RPF1Q9H9Y2 349 aaKnown RBP3.67□□□□□ -1.82
PRPF39-209ENST00000556353 UCK1Q9HA47 277 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 DEPPQ9NTK1 212 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 ANO10Q9NW15 660 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 GDAP2Q9NXN4 497 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 PSME2Q9UL46 239 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 SATB2Q9UPW6 733 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 CCL26Q9Y258 94 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 C15orf41Q9Y2V0 281 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 SPTA1P02549 2419 aa3.67□□□□□ -1.82
PRPF39-209ENST00000556353 NBASA2RRP1 2371 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 FAM168BA1KXE4 195 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 MAGEB16A2A368 324 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 CTAGE15A4D2H0 777 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 RGSL1A5PLK6 1076 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 TMEM150CB9EJG8 249 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 ANKRD63C9JTQ0 380 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 E5RGE8 158 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 LAD1O00515 517 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 PIRO00625 290 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 E2F3O00716 465 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 PRRG1O14668 218 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 PSMA7O14818 248 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 LSM1O15116 133 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms