RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 ASCL1P50553 236 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 RNF144AP50876 292 aaPredicted RBP10.4□□□□□ -0.74
SLIRP-205ENST00000556310 P2RX1P51575 399 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 EEFSECP57772 596 aaKnown RBP10.4□□□□□ -0.74
SLIRP-205ENST00000556310 HPCAP84074 193 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 GPR68Q15743 365 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 PDZK1Q5T2W1 519 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 AP1ARQ63HQ0 302 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 POMZP3Q6PJE2 187 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 CBLN3Q6UW01 205 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 MEX3BQ6ZN04 569 aaKnown RBP10.4□□□□□ -0.74
SLIRP-205ENST00000556310 FRRS1Q6ZNA5 592 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 CHMP1BQ7LBR1 199 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 GDF7Q7Z4P5 450 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 GGNQ86UU5 652 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 GRAMD2AQ8IUY3 354 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 MCEMP1Q8IX19 187 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 UBQLNLQ8IYU4 475 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 TOR1AIP2Q8NFQ8 470 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 ZFP90Q8TF47 636 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 XAGE5Q8WWM1 108 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 SMPDL3BQ92485 455 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 VPS33AQ96AX1 596 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 ITCHQ96J02 903 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 RNF145Q96MT1 663 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 KLHDC3Q9BQ90 382 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 SFXN3Q9BWM7 321 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 TRIM8Q9BZR9 551 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 SAP130Q9H0E3 1048 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 STOML1Q9UBI4 398 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 KCNE5Q9UJ90 142 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 MKLN1Q9UL63 735 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 ICAM5Q9UMF0 924 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 LIPT1Q9Y234 373 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 CARD8Q9Y2G2 431 aa10.4□□□□□ -0.74
SLIRP-205ENST00000556310 CENPVL1A0A0U1RR11 272 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 SLC22A20A6NK97 555 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 GTPBP1O00178 669 aaKnown RBP10.39□□□□□ -0.75
SLIRP-205ENST00000556310 ZNF264O43296 627 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 EIF4E2O60573 245 aaKnown RBP10.39□□□□□ -0.75
SLIRP-205ENST00000556310 RCBTB2O95199 551 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 C1QCP02747 245 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 LINGO3P0C6S8 592 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 PRF1P14222 555 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 CTSSP25774 331 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 PSMA4P25789 261 aaKnown RBP10.39□□□□□ -0.75
SLIRP-205ENST00000556310 ELK4P28324 431 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 OPRM1P35372 400 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 EIF1P41567 113 aaKnown RBP10.39□□□□□ -0.75
SLIRP-205ENST00000556310 ATP4BP51164 291 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 SUCLG1P53597 346 aaKnown RBP10.39□□□□□ -0.75
SLIRP-205ENST00000556310 CLDN15P56746 228 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 CLDN20P56880 219 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 FOXF1Q12946 379 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 SKP2Q13309 424 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 FBXL19-AS1Q494R0 122 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 C6orf10Q5SRN2 563 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 TYW3Q6IPR3 259 aaKnown RBP10.39□□□□□ -0.75
SLIRP-205ENST00000556310 OLIG3Q7RTU3 272 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 LINC00528Q8N1L1 170 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 ZNF619Q8N2I2 560 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 TMCO5AQ8N6Q1 288 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 METTL25Q8N6Q8 603 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 OR5W2Q8NH69 310 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 PNPT1Q8TCS8 783 aaKnown RBP10.39□□□□□ -0.75
SLIRP-205ENST00000556310 ARSGQ96EG1 525 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 TRNT1Q96Q11 434 aaKnown RBP10.39□□□□□ -0.75
SLIRP-205ENST00000556310 NPAS1Q99742 590 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 SIKE1Q9BRV8 207 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 SLC6A13Q9NSD5 602 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 TMEM45AQ9NWC5 275 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 L3MBTL1Q9Y468 752 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 ZNF175Q9Y473 711 aa10.39□□□□□ -0.75
SLIRP-205ENST00000556310 GPC6Q9Y625 555 aaPredicted RBP10.39□□□□□ -0.75
SLIRP-205ENST00000556310 PRAMEF27A3QJZ7 478 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 TMEM229AB2RXF0 380 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 H0YC42 278 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 ST8SIA5O15466 376 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 H6PDO95479 791 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 ANP32DO95626 131 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 NUDT14O95848 222 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 TGM6O95932 706 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 CSTAP01040 98 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 BMP2P12643 396 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 ME2P23368 584 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 ADH6P28332 368 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 CCR4P51679 360 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 MVDP53602 400 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 TPD52P55327 224 aaPredicted RBP10.38□□□□□ -0.75
SLIRP-205ENST00000556310 RPS3AP61247 264 aaKnown RBP10.38□□□□□ -0.75
SLIRP-205ENST00000556310 RAC1P63000 192 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 CBFBQ13951 182 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 FGFBP1Q14512 234 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 SQLEQ14534 574 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 MAPK14Q16539 360 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 NDUFAF6Q330K2 333 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 GTDC1Q4AE62 458 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 GPAT3Q53EU6 434 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 COX20Q5RI15 118 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 OR2A2Q6IF42 318 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms