RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 PP2D1A8MPX8 630 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 ZNF705EA8MWA4 302 aaPredicted RBP2.04□□□□□ -2.08
SCFD1-218ENST00000556256 B4DXG7 233 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 NDC80O14777 642 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 OR1F1O43749 312 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 TBX19O60806 448 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 ZNF254O75437 659 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 FOXH1O75593 365 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 IDH1O75874 414 aaKnown RBP2.04□□□□□ -2.08
SCFD1-218ENST00000556256 SERF1AO75920 110 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 PGK1P00558 417 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 PTMAP06454 111 aaKnown RBP2.04□□□□□ -2.08
SCFD1-218ENST00000556256 IQCF3P0C7M6 154 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 ZNF853P0CG23 659 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 TSPY4P0CV99 314 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 TSPY10P0CW01 314 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 EPB41P11171 864 aaKnown RBP2.04□□□□□ -2.08
SCFD1-218ENST00000556256 KRT13P13646 458 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 PGCP20142 388 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 PAX7P23759 505 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 CD80P33681 288 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 SOX6P35712 828 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 EFNA3P52797 238 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 MRPS11P82912 194 aaKnown RBP2.04□□□□□ -2.08
SCFD1-218ENST00000556256 EWSR1Q01844 656 aaKnown RBP eCLIP2.04□□□□□ -2.08
SCFD1-218ENST00000556256 OC90Q02509 493 aaPredicted RBP2.04□□□□□ -2.08
SCFD1-218ENST00000556256 RAB40BQ12829 278 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 TAF7Q15545 349 aaPredicted RBP2.04□□□□□ -2.08
SCFD1-218ENST00000556256 MAPK6Q16659 721 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 NDUFA9Q16795 377 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 ISXQ2M1V0 245 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 SLC36A3Q495N2 470 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 OR2B11Q5JQS5 317 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 PAGE2BQ5JRK9 111 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 SLC25A24Q6NUK1 477 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 ACSM5Q6NUN0 579 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 FAM71F2Q6NXP2 309 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 SCYL2Q6P3W7 929 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 CES3Q6UWW8 571 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 ZDHHC21Q8IVQ6 265 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 FBXO16Q8IX29 292 aaPredicted RBP2.04□□□□□ -2.08
SCFD1-218ENST00000556256 CNIH3Q8TBE1 160 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 SPRYD4Q8WW59 207 aaPredicted RBP2.04□□□□□ -2.08
SCFD1-218ENST00000556256 MYLPFQ96A32 169 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 HAVCR1Q96D42 359 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 VPS39Q96JC1 886 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 NOL4LQ96MY1 436 aaPredicted RBP2.04□□□□□ -2.08
SCFD1-218ENST00000556256 SLC6A7Q99884 636 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 EBF4Q9BQW3 602 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 TPPP3Q9BW30 176 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 ANKRD30BQ9BXX2 1392 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 RAB33BQ9H082 229 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 B3GNT2Q9NY97 397 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 TMOD2Q9NZR1 351 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 ONECUT1Q9UBC0 465 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 SH3BGRL2Q9UJC5 107 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 KLHL21Q9UJP4 597 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 ANGPTL2Q9UKU9 493 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 BLOC1S6Q9UL45 172 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 CLEC4EQ9ULY5 219 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 PDE10AQ9Y233 779 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 OARD1Q9Y530 152 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 FRMPD4Q14CM0 1322 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 H3BMQ9 156 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 WWP2O00308 870 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 BTN3A3O00478 584 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 OR7A17O14581 309 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 XPO1O14980 1071 aaKnown RBP2.03□□□□□ -2.08
SCFD1-218ENST00000556256 MSH4O15457 936 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 SEMG1P04279 462 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 PCCBP05166 539 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 IGLL1P15814 213 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 NMT1P30419 496 aaKnown RBP2.03□□□□□ -2.08
SCFD1-218ENST00000556256 ADSSP30520 456 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 PRKAR2BP31323 418 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 OTX2P32243 289 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 RGRP47804 291 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 RPL29P47914 159 aaKnown RBP2.03□□□□□ -2.08
SCFD1-218ENST00000556256 PLA2G16P53816 162 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 OTUD4Q01804 1114 aaKnown RBP2.03□□□□□ -2.08
SCFD1-218ENST00000556256 EGFEM1PQ0D2K5 195 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 SNTB2Q13425 540 aaKnown RBP2.03□□□□□ -2.08
SCFD1-218ENST00000556256 SELPLGQ14242 412 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 CCDC57Q2TAC2 916 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 USH1GQ495M9 461 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 NADK2Q4G0N4 442 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 OR5M10Q6IEU7 315 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 FAM199XQ6PEV8 388 aaPredicted RBP2.03□□□□□ -2.08
SCFD1-218ENST00000556256 CEND1Q8N111 149 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 LRRC43Q8N309 656 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 CADM2Q8N3J6 435 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 GMCL1P1Q8NEA9 526 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 DENND6BQ8NEG7 585 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 OR2A12Q8NGT7 310 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 ZNF564Q8TBZ8 553 aaPredicted RBP2.03□□□□□ -2.08
SCFD1-218ENST00000556256 AENQ8WTP8 325 aaKnown RBP2.03□□□□□ -2.08
SCFD1-218ENST00000556256 TRUB1Q8WWH5 349 aaKnown RBP2.03□□□□□ -2.08
SCFD1-218ENST00000556256 SLC25A38Q96DW6 304 aa2.03□□□□□ -2.08
SCFD1-218ENST00000556256 CELF6Q96J87 481 aaKnown RBP2.03□□□□□ -2.08
SCFD1-218ENST00000556256 Q9H3A6 140 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms