RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 OPN1LWP04000 364 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 COX6B1P14854 86 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 HOXB9P17482 250 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-217ENST00000556203 BMP5P22003 454 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 PSMA4P25789 261 aaKnown RBP13.69□□□□□ -0.22
ACTN1-217ENST00000556203 EIF1P41567 113 aaKnown RBP13.69□□□□□ -0.22
ACTN1-217ENST00000556203 DSTNP60981 165 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 TFF3Q07654 80 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 SKP2Q13309 424 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 CBFBQ13951 182 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 FGFBP1Q14512 234 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 TOMM34Q15785 309 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-217ENST00000556203 SLC25A35Q3KQZ1 300 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 PAGE3Q5JUK9 113 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 METTL21CQ5VZV1 264 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 AP1ARQ63HQ0 302 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 CGB2Q6NT52 195 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 LRRC74BQ6ZQY2 392 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 EIF3MQ7L2H7 374 aaKnown RBP13.69□□□□□ -0.22
ACTN1-217ENST00000556203 P4HA3Q7Z4N8 544 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 GPR119Q8TDV5 335 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 MARVELD3Q96A59 401 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 ARSGQ96EG1 525 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 TM9SF2Q99805 663 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 PINK1Q9BXM7 581 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 SLC38A1Q9H2H9 487 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 CCDC134Q9H6E4 229 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 TMEM185BQ9H7F4 350 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 SLC25A37Q9NYZ2 338 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 SLAMF8Q9P0V8 285 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 STOML1Q9UBI4 398 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 SLC35A3Q9Y2D2 325 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 A0A1W2PP18 115 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 AGAP5A6NIR3 686 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 CLDN24A6NM45 220 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 CLIC1O00299 241 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 EIF1AYO14602 144 aaKnown RBP13.68□□□□□ -0.22
ACTN1-217ENST00000556203 RCBTB2O95199 551 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 TGM6O95932 706 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 BCHEP06276 602 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 TMIGD3P0DMS9 266 aaPredicted RBP13.68□□□□□ -0.22
ACTN1-217ENST00000556203 PRKCAP17252 672 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 IL11P20809 199 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 CTSSP25774 331 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 PGM1P36871 562 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 MDH1P40925 334 aaKnown RBP13.68□□□□□ -0.22
ACTN1-217ENST00000556203 AGFG1P52594 562 aaKnown RBP13.68□□□□□ -0.22
ACTN1-217ENST00000556203 ARFIP2P53365 341 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 RPS3AP61247 264 aaKnown RBP13.68□□□□□ -0.22
ACTN1-217ENST00000556203 RAC1P63000 192 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 KCNJ10P78508 379 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 QPRTQ15274 297 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 RGNQ15493 299 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 MAPK11Q15759 364 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 LRIF1Q5T3J3 769 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 GGNQ86UU5 652 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 MSRB3Q8IXL7 192 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 METTL25Q8N6Q8 603 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 RELL2Q8NC24 303 aaPredicted RBP13.68□□□□□ -0.22
ACTN1-217ENST00000556203 FBXO27Q8NI29 283 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 ZNF524Q96C55 264 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 ZNF845Q96IR2 970 aaPredicted RBP13.68□□□□□ -0.22
ACTN1-217ENST00000556203 THUMPD3Q9BV44 507 aaKnown RBP13.68□□□□□ -0.22
ACTN1-217ENST00000556203 RUBCNLQ9H714 662 aa13.68□□□□□ -0.22
ACTN1-217ENST00000556203 NPDC1Q9NQX5 325 aaPredicted RBP13.68□□□□□ -0.22
ACTN1-217ENST00000556203 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.68□□□□□ -0.22
ACTN1-217ENST00000556203 THUMPD1Q9NXG2 353 aaKnown RBP13.68□□□□□ -0.22
ACTN1-217ENST00000556203 ZNF629Q9UEG4 869 aaPredicted RBP13.68□□□□□ -0.22
ACTN1-217ENST00000556203 GPC6Q9Y625 555 aaPredicted RBP13.68□□□□□ -0.22
ACTN1-217ENST00000556203 PHF3Q92576 2039 aaKnown RBP13.68□□□□□ -0.22
ACTN1-217ENST00000556203 SLC22A20A6NK97 555 aa13.67□□□□□ -0.22
ACTN1-217ENST00000556203 NUDT7P0C024 238 aa13.67□□□□□ -0.22
ACTN1-217ENST00000556203 TFPTP0C1Z6 253 aa13.67□□□□□ -0.22
ACTN1-217ENST00000556203 ME2P23368 584 aa13.67□□□□□ -0.22
ACTN1-217ENST00000556203 ELK4P28324 431 aa13.67□□□□□ -0.22
ACTN1-217ENST00000556203 ADH6P28332 368 aa13.67□□□□□ -0.22
ACTN1-217ENST00000556203 OPRM1P35372 400 aa13.67□□□□□ -0.22
ACTN1-217ENST00000556203 EIF1AXP47813 144 aaKnown RBP13.67□□□□□ -0.22
ACTN1-217ENST00000556203 FOXF2Q12947 444 aa13.67□□□□□ -0.22
ACTN1-217ENST00000556203 PON3Q15166 354 aa13.67□□□□□ -0.22
ACTN1-217ENST00000556203 SGCBQ16585 318 aa13.67□□□□□ -0.22
ACTN1-217ENST00000556203 POMZP3Q6PJE2 187 aa13.67□□□□□ -0.22
ACTN1-217ENST00000556203 GCNT2Q8N0V5 402 aa13.67□□□□□ -0.22
ACTN1-217ENST00000556203 FAM71CQ8NEG0 241 aa13.67□□□□□ -0.22
ACTN1-217ENST00000556203 SLC38A5Q8WUX1 472 aa13.67□□□□□ -0.22
ACTN1-217ENST00000556203 FIG4Q92562 907 aa13.67□□□□□ -0.22
ACTN1-217ENST00000556203 INTS12Q96CB8 462 aaKnown RBP13.67□□□□□ -0.22
ACTN1-217ENST00000556203 MRGPRX4Q96LA9 322 aa13.67□□□□□ -0.22
ACTN1-217ENST00000556203 ZFP3Q96NJ6 502 aa13.67□□□□□ -0.22
ACTN1-217ENST00000556203 RAD21L1Q9H4I0 556 aa13.67□□□□□ -0.22
ACTN1-217ENST00000556203 MTHFD2LQ9H903 347 aaPredicted RBP13.67□□□□□ -0.22
ACTN1-217ENST00000556203 CALML5Q9NZT1 146 aa13.67□□□□□ -0.22
ACTN1-217ENST00000556203 VAPAQ9P0L0 249 aa13.67□□□□□ -0.22
ACTN1-217ENST00000556203 LEF1Q9UJU2 399 aaPredicted RBP13.67□□□□□ -0.22
ACTN1-217ENST00000556203 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 TMEM247A6NEH6 219 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 TNFSF11O14788 317 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 DNAJA2O60884 412 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 IL18BPO95998 194 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 RPS4Y1P22090 263 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms