RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 RASSF4Q9H2L5 321 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 ZNF552Q9H707 407 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-220ENST00000555634 GALNT9Q9HCQ5 603 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 RLIMQ9NVW2 624 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 FLRT3Q9NZU0 649 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 STOML1Q9UBI4 398 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 DNAJB9Q9UBS3 223 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 CNOT11Q9UKZ1 510 aaKnown RBP10.24□□□□□ -0.77
SHMT2-220ENST00000555634 SPIN1Q9Y657 262 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-220ENST00000555634 WDFY3Q8IZQ1 3526 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 HEATR5AQ86XA9 2040 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 A0A087WZY1 265 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 CENPVL1A0A0U1RR11 272 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 TRAPPC13A5PLN9 417 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 CPSF4LA6NMK7 179 aaKnown RBP10.23□□□□□ -0.77
SHMT2-220ENST00000555634 FAAHO00519 579 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 SNPHO15079 494 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 GMFGO60234 142 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 NME2P1O60361 137 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 CDC40O60508 579 aaKnown RBP eCLIP10.23□□□□□ -0.77
SHMT2-220ENST00000555634 TIPRLO75663 272 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 OR5F1O95221 314 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 GADD45GO95257 159 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 F10P00742 488 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 MT-ND1P03886 318 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 H1F0P07305 194 aaKnown RBP10.23□□□□□ -0.77
SHMT2-220ENST00000555634 SP1P08047 785 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 PNMTP11086 282 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 SFTPCP11686 197 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 ZNF23P17027 643 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 CNR1P21554 472 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 NME2P22392 152 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 RRM2P31350 389 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 IFNGR2P38484 337 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 EIF1P41567 113 aaKnown RBP10.23□□□□□ -0.77
SHMT2-220ENST00000555634 RNF144AP50876 292 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-220ENST00000555634 CDH12P55289 794 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 VLDLRP98155 873 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 CD226Q15762 336 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 ATP6AP1Q15904 470 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 INAQ16352 499 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 GLIPR1L2Q4G1C9 344 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 ZNF766Q5HY98 468 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 COLEC12Q5KU26 742 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 ENTPD8Q5MY95 495 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 FNDC7Q5VTL7 733 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 PLCZ1Q86YW0 608 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 OFCC1Q8IZS5 231 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 CLIP4Q8N3C7 705 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 LINC00471Q8N535 108 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 PAPD5Q8NDF8 572 aaKnown RBP10.23□□□□□ -0.77
SHMT2-220ENST00000555634 CATSPER1Q8NEC5 780 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 OR6T1Q8NGN1 323 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 DUSP19Q8WTR2 217 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 ST8SIA1Q92185 356 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 CNOT9Q92600 299 aaKnown RBP10.23□□□□□ -0.77
SHMT2-220ENST00000555634 ZBTB8AQ96BR9 441 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 ZG16BQ96DA0 208 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 CENPNQ96H22 339 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-220ENST00000555634 ADNPQ9H2P0 1102 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 ANKRD19PQ9H560 264 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 RNPEPL1Q9HAU8 725 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 KLHL1Q9NR64 748 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 SERINC1Q9NRX5 453 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 TAS2R10Q9NYW0 307 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 KCNE5Q9UJ90 142 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 TUBD1Q9UJT1 453 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 SAMHD1Q9Y3Z3 626 aaKnown RBP10.23□□□□□ -0.77
SHMT2-220ENST00000555634 PCDHGB6Q9Y5F9 930 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 ORC6Q9Y5N6 252 aa10.23□□□□□ -0.77
SHMT2-220ENST00000555634 URB1O60287 2271 aaKnown RBP10.22□□□□□ -0.77
SHMT2-220ENST00000555634 IGLV3-32A0A0A0MS00 114 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 ELOA3DA6NLF2 546 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-220ENST00000555634 CLDN24A6NM45 220 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 GNB5O14775 395 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 CLOCKO15516 846 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 FRS3O43559 492 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 ZNF354AO60765 605 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-220ENST00000555634 CBR3O75828 277 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 NEURL1O76050 574 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 ATP6V1G2O95670 118 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 SEMG1P04279 462 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 GKN3PP0CG01 181 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 ANPEPP15144 967 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 TNFRSF1BP20333 461 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 GDF1P27539 372 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 IDH2P48735 452 aaKnown RBP10.22□□□□□ -0.77
SHMT2-220ENST00000555634 TNFSF10P50591 281 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 SESN3P58005 492 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 EPS8Q12929 822 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 KCNAB2Q13303 367 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 TRAM2Q15035 370 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 SNCBQ16143 134 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 NDUFAF6Q330K2 333 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 ELOA3BQ3SY89 546 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 ALG10BQ5I7T1 473 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 SPINK14Q6IE38 97 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 SLC25A25Q6KCM7 469 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 ULK3Q6PHR2 472 aa10.22□□□□□ -0.77
SHMT2-220ENST00000555634 IGFL2Q6UWQ7 119 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms