RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 SAP130Q9H0E3 1048 aa10.62□□□□□ -0.71
VRK1-204ENST00000555351 SERHL2Q9H4I8 314 aa10.62□□□□□ -0.71
VRK1-204ENST00000555351 TMBIM4Q9HC24 238 aa10.62□□□□□ -0.71
VRK1-204ENST00000555351 PLSCR4Q9NRQ2 329 aa10.62□□□□□ -0.71
VRK1-204ENST00000555351 PNPOQ9NVS9 261 aa10.62□□□□□ -0.71
VRK1-204ENST00000555351 NKIRAS1Q9NYS0 192 aa10.62□□□□□ -0.71
VRK1-204ENST00000555351 ITGB1BP2Q9UKP3 347 aa10.62□□□□□ -0.71
VRK1-204ENST00000555351 TESMINQ9Y4I5 508 aa10.62□□□□□ -0.71
VRK1-204ENST00000555351 KCNE3Q9Y6H6 103 aa10.62□□□□□ -0.71
VRK1-204ENST00000555351 CCDC168Q8NDH2 2452 aa10.62□□□□□ -0.71
VRK1-204ENST00000555351 A0A0J9YW62 118 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 SERINC4A6NH21 518 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 SHISA8B8ZZ34 492 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 CASKO14936 926 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 KIAA0513O60268 411 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 SMNDC1O75940 238 aaKnown RBP eCLIP10.61□□□□□ -0.71
VRK1-204ENST00000555351 AQP8O94778 261 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 UBL4AP11441 157 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 NID1P14543 1247 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 PPP3CBP16298 524 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 KHKP50053 298 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 ANXA11P50995 505 aaKnown RBP10.61□□□□□ -0.71
VRK1-204ENST00000555351 ART1P52961 327 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 IST1P53990 364 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 CARD18P57730 90 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 SELENBP1Q13228 472 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 CBFBQ13951 182 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 RNPS1Q15287 305 aaKnown RBP10.61□□□□□ -0.71
VRK1-204ENST00000555351 FAM174BQ3ZCQ3 159 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 SPANXN4Q5MJ08 99 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 HBMQ6B0K9 141 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 ZNF474Q6S9Z5 364 aaPredicted RBP10.61□□□□□ -0.71
VRK1-204ENST00000555351 CBLN3Q6UW01 205 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 PLXDC2Q6UX71 529 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 EIF3MQ7L2H7 374 aaKnown RBP10.61□□□□□ -0.71
VRK1-204ENST00000555351 C16orf62Q7Z3J2 963 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 ANKRD42Q8N9B4 389 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 OR5D16Q8NGK9 328 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 ST8SIA1Q92185 356 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 CPNE4Q96A23 557 aaPredicted RBP10.61□□□□□ -0.71
VRK1-204ENST00000555351 ZBTB18Q99592 522 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 TACO1Q9BSH4 297 aaKnown RBP10.61□□□□□ -0.71
VRK1-204ENST00000555351 LAT2Q9GZY6 243 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 OR10A4Q9H209 315 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 OR51I1Q9H343 314 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 MANSC1Q9H8J5 431 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 ZNF226Q9NYT6 803 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 PROCRQ9UNN8 238 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 LIPT1Q9Y234 373 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 SLC35A3Q9Y2D2 325 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 CARD8Q9Y2G2 431 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 GPR45Q9Y5Y3 372 aa10.61□□□□□ -0.71
VRK1-204ENST00000555351 C16orf97H3BN30 126 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 ZNF195O14628 629 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 CXCL13O43927 109 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 GMFGO60234 142 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 UGT2B17O75795 530 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 NUDT14O95848 222 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 PLGP00747 810 aaPredicted RBP10.6□□□□□ -0.71
VRK1-204ENST00000555351 RAF1P04049 648 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 HRGP04196 525 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 IL6P05231 212 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 PGRP06401 933 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 ALDOCP09972 364 aaKnown RBP10.6□□□□□ -0.71
VRK1-204ENST00000555351 POU2F1P14859 743 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 IDO1P14902 403 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 PRKCAP17252 672 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 DNASE1P24855 282 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 FKBP2P26885 142 aaKnown RBP10.6□□□□□ -0.71
VRK1-204ENST00000555351 UGT2B10P36537 528 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 CPOXP36551 454 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 CTBP2P56545 445 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 MAGOHP61326 146 aaKnown RBP10.6□□□□□ -0.71
VRK1-204ENST00000555351 RPS26P62854 115 aaKnown RBP10.6□□□□□ -0.71
VRK1-204ENST00000555351 FAM27E3Q08E93 113 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 FOXF1Q12946 379 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 SKP2Q13309 424 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 GSTA3Q16772 222 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 PDZK1Q5T2W1 519 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 FBXW10Q5XX13 1052 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 PAMR1Q6UXH9 720 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 SLC43A2Q8N370 569 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 FAM71CQ8NEG0 241 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 TMEM234Q8WY98 164 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 OSTF1Q92882 214 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 ALPK1Q96QP1 1244 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 NPAS1Q99742 590 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 PLEKHF2Q9H8W4 249 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 KCNE5Q9UJ90 142 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 WDR45Q9Y484 360 aa10.6□□□□□ -0.71
VRK1-204ENST00000555351 NPIPA5A0A0B4J1W7 369 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 CCDC154A6NI56 674 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 NPIPA7E9PJI5 369 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 TNFSF11O14788 317 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 OIP5O43482 229 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 FCMRO60667 390 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 CPSF4O95639 269 aaKnown RBP10.59□□□□□ -0.71
VRK1-204ENST00000555351 CSTAP01040 98 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 NPIPA8P0DM63 369 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 PGCP20142 388 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms