RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 FZD5Q13467 585 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 KLF9Q13886 244 aaPredicted RBP9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 PGGHGQ32M88 737 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 ZNF791Q3KP31 576 aaPredicted RBP9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 OR4C11Q6IEV9 310 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 KIAA1161Q6NSJ0 714 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 FBXO46Q6PJ61 603 aaPredicted RBP9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 CXXC5Q7LFL8 322 aaKnown RBP9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 NLRC3Q7RTR2 1065 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 PXKQ7Z7A4 578 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 OR6V1Q8N148 313 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 OR4F15Q8NGB8 312 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 OR52H1Q8NGJ2 320 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 OR6M1Q8NGM8 313 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 SCARB1Q8WTV0 552 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 HERVK_113Q902F9 699 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 MOAP1Q96BY2 351 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 SPRTNQ9H040 489 aaPredicted RBP9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 ZCCHC4Q9H5U6 513 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 TRPV4Q9HBA0 871 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 NPDC1Q9NQX5 325 aaPredicted RBP9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 NANSQ9NR45 359 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 RPS6KB2Q9UBS0 482 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 ING1Q9UK53 422 aaPredicted RBP9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 GPR52Q9Y2T5 361 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 PCYT1BQ9Y5K3 369 aaPredicted RBP9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 TRAV1-2A0A0B4J238 106 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 A0A0G2JK05 382 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 PLSCR5A0PG75 271 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 IGLON5A6NGN9 336 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 H7BY64 318 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 SC5DO75845 299 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 FGF2P09038 288 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 HOXB1P14653 301 aaPredicted RBP9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 RAB3AP20336 220 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 PAICSP22234 425 aaKnown RBP9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 SSTR2P30874 369 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 OMPP47874 163 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 AP3S2P59780 193 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 ZP1P60852 638 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 TSPAN5P62079 268 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 RPS26P62854 115 aaKnown RBP9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 CSNK1G2P78368 415 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 PRDX1Q06830 199 aaKnown RBP9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 CRYZQ08257 329 aaKnown RBP9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 DBPQ10586 325 aaPredicted RBP9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 HSPB3Q12988 150 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 SNTB2Q13425 540 aaKnown RBP9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 MAPK14Q16539 360 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 TMEM64Q6YI46 380 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 OR6T1Q8NGN1 323 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 SFXN5Q8TD22 340 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 SMIM4Q8WVI0 70 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 RAB8BQ92930 207 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 EXOSC8Q96B26 276 aaKnown RBP9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 ARMC5Q96C12 935 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 LINC00052Q96N35 136 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 PRAP1Q96NZ9 151 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 FERD3LQ96RJ6 166 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 TIMM29Q9BSF4 260 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 C20orf85Q9H1P6 137 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 LHX9Q9NQ69 397 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 IFT46Q9NQC8 304 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 PHPT1Q9NRX4 125 aaPredicted RBP9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 COQ3Q9NZJ6 369 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 SCML1Q9UN30 329 aa9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 KLF2Q9Y5W3 355 aaPredicted RBP9.95□□□□□ -0.82
MTHFD1-210ENST00000555252 A0A0A6YYD5 115 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 A0A1B0GW55 424 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 FEZF1A0PJY2 475 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 SLC9B1P1A6NJY1 282 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 PGRMC2O15173 223 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 TMPRSS11DO60235 418 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 ADH1BP00325 375 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 DUX4L2P0CJ85 424 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 DUX4L3P0CJ86 424 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 DUX4L4P0CJ87 422 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 DUX4L5P0CJ88 424 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 DUX4L6P0CJ89 424 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 DUX4L7P0CJ90 424 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 NTSP30990 170 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 ATP6V1E1P36543 226 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 RAB28P51157 221 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 VSX2P58304 361 aaPredicted RBP9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 TAS2R41P59536 307 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 BTN1A1Q13410 526 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 DECR1Q16698 335 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 TCTE1Q5JU00 501 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 NUDT18Q6ZVK8 323 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 SHFQ7M4L6 423 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 UBE3DQ7Z6J8 389 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 SLC44A3Q8N4M1 653 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 KCT2Q8NC54 265 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 OR2L8Q8NGY9 312 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 BADQ92934 168 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 SFXN2Q96NB2 322 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 ARHGDIGQ99819 225 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 WFDC6Q9BQY6 131 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 OR51I1Q9H343 314 aa9.94□□□□□ -0.82
MTHFD1-210ENST00000555252 WDR26Q9H7D7 661 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms