RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 CDK6Q00534 326 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 GINS1Q14691 196 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 GUCA2BQ16661 112 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 SFXN4Q6P4A7 337 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 ZNF613Q6PF04 617 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 ZFPM2Q8WW38 1151 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 RGMAQ96B86 450 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 TMEM38AQ9H6F2 299 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 C1GALT1Q9NS00 363 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 STOX2Q9P2F5 926 aaPredicted RBP14.6□□□□□ -0.07
SYNE3-203ENST00000554873 OR2AG2A6NM03 316 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 C2orf74A8MZ97 194 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 DVL2O14641 736 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 CREBL2O60519 120 aaPredicted RBP14.6□□□□□ -0.07
SYNE3-203ENST00000554873 SLCO2B1O94956 709 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 GBAP04062 536 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 SELPP16109 830 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 FPR3P25089 353 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 TIA1P31483 386 aaKnown RBP eCLIP14.6□□□□□ -0.07
SYNE3-203ENST00000554873 RAD52P43351 418 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 RPS13P62277 151 aaKnown RBP14.6□□□□□ -0.07
SYNE3-203ENST00000554873 SLC5A12Q1EHB4 618 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 MANEAQ5SRI9 462 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 SLC6A19Q695T7 634 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 KIAA1161Q6NSJ0 714 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 SLC36A4Q6YBV0 504 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 MOB3CQ70IA8 216 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 TEFMQ96QE5 360 aaKnown RBP14.6□□□□□ -0.07
SYNE3-203ENST00000554873 GSDMCQ9BYG8 508 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 C8orf33Q9H7E9 229 aaPredicted RBP14.6□□□□□ -0.07
SYNE3-203ENST00000554873 NINQ8N4C6 2090 aa14.6□□□□□ -0.07
SYNE3-203ENST00000554873 GSAPA4D1B5 854 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 C5orf52A6NGY3 159 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 GSTZ1O43708 216 aaPredicted RBP14.59□□□□□ -0.07
SYNE3-203ENST00000554873 MC1RQ01726 317 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 EEF1A2Q05639 463 aaKnown RBP14.59□□□□□ -0.07
SYNE3-203ENST00000554873 NHLRC1Q6VVB1 395 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 TMEM185AQ8NFB2 350 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 OR52N2Q8NGI0 321 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 GOT1L1Q8NHS2 421 aaPredicted RBP14.59□□□□□ -0.07
SYNE3-203ENST00000554873 HAVCR2Q8TDQ0 301 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 THAP4Q8WY91 577 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 GTF3AQ92664 365 aaKnown RBP14.59□□□□□ -0.07
SYNE3-203ENST00000554873 TMEM121BQ9BXQ6 578 aaPredicted RBP14.59□□□□□ -0.07
SYNE3-203ENST00000554873 ZDHHC6Q9H6R6 413 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 GPN1Q9HCN4 374 aaPredicted RBP14.59□□□□□ -0.07
SYNE3-203ENST00000554873 ARPC1BO15143 372 aaKnown RBP14.59□□□□□ -0.07
SYNE3-203ENST00000554873 GP1BAP07359 652 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 UBBP0CG47 229 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 UBCP0CG48 685 aaKnown RBP14.59□□□□□ -0.07
SYNE3-203ENST00000554873 RNF224P0DH78 156 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 MPGP29372 298 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 GIPRP48546 466 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 RPS27AP62979 156 aaKnown RBP14.59□□□□□ -0.07
SYNE3-203ENST00000554873 UBA52P62987 128 aaKnown RBP14.59□□□□□ -0.07
SYNE3-203ENST00000554873 RBMS2Q15434 407 aaKnown RBP14.59□□□□□ -0.07
SYNE3-203ENST00000554873 ACSM5Q6NUN0 579 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 KIAA1211LQ6NV74 962 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 KLHL36Q8N4N3 616 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 LILRA3Q8N6C8 439 aaPredicted RBP14.59□□□□□ -0.07
SYNE3-203ENST00000554873 FIBINQ8TAL6 211 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 PIGKQ92643 395 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 ZNF707Q96C28 371 aaPredicted RBP14.59□□□□□ -0.07
SYNE3-203ENST00000554873 BHLHE41Q9C0J9 482 aaPredicted RBP14.59□□□□□ -0.07
SYNE3-203ENST00000554873 REEP4Q9H6H4 257 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 POLE3Q9NRF9 147 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 UFSP2Q9NUQ7 469 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 MAP4K5Q9Y4K4 846 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 CCDC88CQ9P219 2028 aa14.59□□□□□ -0.07
SYNE3-203ENST00000554873 SLC9B1P1A6NJY1 282 aa14.58□□□□□ -0.08
SYNE3-203ENST00000554873 AKR7A3O95154 331 aa14.58□□□□□ -0.08
SYNE3-203ENST00000554873 DDX6P26196 483 aaKnown RBP eCLIP14.58□□□□□ -0.08
SYNE3-203ENST00000554873 GPX4P36969 197 aaPredicted RBP14.58□□□□□ -0.08
SYNE3-203ENST00000554873 P2RY4P51582 365 aa14.58□□□□□ -0.08
SYNE3-203ENST00000554873 SMCO1Q147U7 214 aa14.58□□□□□ -0.08
SYNE3-203ENST00000554873 ZNF630Q2M218 657 aaPredicted RBP14.58□□□□□ -0.08
SYNE3-203ENST00000554873 ELFN2Q5R3F8 820 aa14.58□□□□□ -0.08
SYNE3-203ENST00000554873 ZNF626Q68DY1 528 aa14.58□□□□□ -0.08
SYNE3-203ENST00000554873 TPRA1Q86W33 373 aa14.58□□□□□ -0.08
SYNE3-203ENST00000554873 OR5AK3PQ8NH89 298 aa14.58□□□□□ -0.08
SYNE3-203ENST00000554873 PEX11GQ96HA9 241 aa14.58□□□□□ -0.08
SYNE3-203ENST00000554873 TMEM41AQ96HV5 264 aa14.58□□□□□ -0.08
SYNE3-203ENST00000554873 OPN4Q9UHM6 478 aa14.58□□□□□ -0.08
SYNE3-203ENST00000554873 A0A1B0GTQ1 180 aa14.58□□□□□ -0.08
SYNE3-203ENST00000554873 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.58□□□□□ -0.08
SYNE3-203ENST00000554873 SLC16A8O95907 504 aa14.58□□□□□ -0.08
SYNE3-203ENST00000554873 HEXAP06865 529 aa14.58□□□□□ -0.08
SYNE3-203ENST00000554873 CBR1P16152 277 aa14.58□□□□□ -0.08
SYNE3-203ENST00000554873 GDNFP39905 211 aa14.58□□□□□ -0.08
SYNE3-203ENST00000554873 PCBP3P57721 371 aaKnown RBP14.58□□□□□ -0.08
SYNE3-203ENST00000554873 GMFBP60983 142 aa14.58□□□□□ -0.08
SYNE3-203ENST00000554873 RELQ04864 619 aaPredicted RBP14.58□□□□□ -0.08
SYNE3-203ENST00000554873 ZDHHC20Q5W0Z9 365 aa14.58□□□□□ -0.08
SYNE3-203ENST00000554873 ADAT1Q9BUB4 502 aaKnown RBP14.58□□□□□ -0.08
SYNE3-203ENST00000554873 QRSL1Q9H0R6 528 aaKnown RBP14.58□□□□□ -0.08
SYNE3-203ENST00000554873 RRAGCQ9HB90 399 aa14.58□□□□□ -0.08
SYNE3-203ENST00000554873 TAS2R5Q9NYW4 299 aa14.58□□□□□ -0.08
SYNE3-203ENST00000554873 GHRLQ9UBU3 117 aa14.58□□□□□ -0.08
SYNE3-203ENST00000554873 SNRPGP15A8MWD9 76 aa14.57□□□□□ -0.08
SYNE3-203ENST00000554873 C5orf58C9J3I9 102 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms