RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 OMDQ99983 421 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 APOL2Q9BQE5 337 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 RIOK1Q9BRS2 568 aaKnown RBP3.88□□□□□ -1.79
SCFD1-211ENST00000554437 NDUFAF3Q9BU61 184 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 MRPL37Q9BZE1 423 aaKnown RBP3.88□□□□□ -1.79
SCFD1-211ENST00000554437 GLT8D2Q9H1C3 349 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 FAM124BQ9H5Z6 455 aaPredicted RBP3.88□□□□□ -1.79
SCFD1-211ENST00000554437 TDRD3Q9H7E2 651 aaKnown RBP3.88□□□□□ -1.79
SCFD1-211ENST00000554437 CUTCQ9NTM9 273 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 KLHL28Q9NXS3 571 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 ARMCX1Q9P291 453 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 LHX3Q9UBR4 397 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 PIGLQ9Y2B2 252 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 GMEB1Q9Y692 573 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 ABCA7Q8IZY2 2146 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 AGRNO00468 2067 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 LOC100506127A0A0U1RQW1 187 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 HSBP1L1C9JCN9 74 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 ZSCAN12O43309 604 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 DFNA5O60443 496 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 RANBP6O60518 1105 aaKnown RBP3.87□□□□□ -1.79
SCFD1-211ENST00000554437 SCGNO76038 276 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 KRT6AP02538 564 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 ANXA4P09525 319 aaPredicted RBP3.87□□□□□ -1.79
SCFD1-211ENST00000554437 PRKACAP17612 351 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 TPSB2P20231 275 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 PCMT1P22061 227 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 ANXA13P27216 316 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 ACADSBP45954 432 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 CRYBB1P53674 252 aaPredicted RBP3.87□□□□□ -1.79
SCFD1-211ENST00000554437 KRTAP10-3P60369 221 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 RPS15P62841 145 aaKnown RBP3.87□□□□□ -1.79
SCFD1-211ENST00000554437 CDKL1Q00532 357 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 ELAVL3Q14576 367 aaKnown RBP3.87□□□□□ -1.79
SCFD1-211ENST00000554437 ABRAXAS2Q15018 415 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 TPSAB1Q15661 275 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 CNPY1Q3B7I2 92 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 Q3ZCU0 254 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 NKAIN1Q4KMZ8 207 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 CTSL3PQ5NE16 218 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 LIN9Q5TKA1 542 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 WDR25Q64LD2 544 aaPredicted RBP3.87□□□□□ -1.79
SCFD1-211ENST00000554437 CDC42EP5Q6NZY7 148 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 CWC27Q6UX04 472 aaKnown RBP3.87□□□□□ -1.79
SCFD1-211ENST00000554437 VITQ6UXI7 678 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 EIF3MQ7L2H7 374 aaKnown RBP3.87□□□□□ -1.79
SCFD1-211ENST00000554437 GOLGA7Q7Z5G4 137 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 LUZP2Q86TE4 346 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 SLC22A16Q86VW1 577 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 GPD1LQ8N335 351 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 FBXL16Q8N461 479 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 SYT14Q8NB59 555 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 TMEM37Q8WXS4 190 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 PIGCQ92535 297 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 ITFG2Q969R8 447 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 TMIGD2Q96BF3 282 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 RPRD1AQ96P16 312 aaPredicted RBP3.87□□□□□ -1.79
SCFD1-211ENST00000554437 PANX1Q96RD7 426 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 DNTTIP1Q9H147 329 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 TMEM185BQ9H7F4 350 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 SYNDIG1Q9H7V2 258 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 IL1RL2Q9HB29 575 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 CYP3A43Q9HB55 503 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 CHRAC1Q9NRG0 131 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 PRR34Q9NV39 138 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 SLC2A8Q9NY64 477 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 GCNT4Q9P109 453 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 DHRS4-AS1Q9P1J3 65 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 PEF1Q9UBV8 284 aaKnown RBP3.87□□□□□ -1.79
SCFD1-211ENST00000554437 SEC14L4Q9UDX3 406 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 DIMT1Q9UNQ2 313 aaKnown RBP3.87□□□□□ -1.79
SCFD1-211ENST00000554437 SLC9A8Q9Y2E8 581 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 CARMIL1Q5VZK9 1371 aa3.87□□□□□ -1.79
SCFD1-211ENST00000554437 ZNF487B1APH4 448 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 GOLGA8TH3BQL2 631 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 K7ERI5 159 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 K7ERQ8 282 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 KBTBD11O94819 623 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 IGKV3-15P01624 115 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 CRYGCP07315 174 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 CPN1P15169 458 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 CYP11B1P15538 503 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 TSPAN8P19075 237 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 U2AF2P26368 475 aaKnown RBP eCLIP3.86□□□□□ -1.793e-8■■■□□ 15.2
SCFD1-211ENST00000554437 CYLC1P35663 651 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-211ENST00000554437 ATP5C1P36542 298 aaKnown RBP3.86□□□□□ -1.79
SCFD1-211ENST00000554437 FDFT1P37268 417 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 NPY2RP49146 381 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 RUNX3Q13761 415 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 SLC22A6Q4U2R8 563 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 RAET1LQ5VY80 246 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 ATL3Q6DD88 541 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 COMTD1Q86VU5 262 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 EFCAB13Q8IY85 973 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 CCDC36Q8IYA8 594 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 TCAIMQ8N3R3 496 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 TRIML2Q8N7C3 387 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 MLKLQ8NB16 471 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 FLVCR1-AS1Q8TAF5 88 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 P3H4Q92791 437 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms