RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 SPANXN4Q5MJ08 99 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 SAXO2Q658L1 398 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 HEPHL1Q6MZM0 1159 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 PLXDC2Q6UX71 529 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 SPNS3Q6ZMD2 512 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 LUZP2Q86TE4 346 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 GLB1L3Q8NCI6 653 aaPredicted RBP9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 TOR1AIP2Q8NFQ8 470 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 OR5D16Q8NGK9 328 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 FNDC9Q8TBE3 224 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 PHOSPHO1Q8TCT1 267 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 SMPDL3BQ92485 455 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 FIG4Q92562 907 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 NINJ1Q92982 152 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 STARD4Q96DR4 205 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 ARSGQ96EG1 525 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 SH3YL1Q96HL8 342 aaPredicted RBP9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 MAELQ96JY0 434 aaKnown RBP9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 RNF145Q96MT1 663 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 CCDC115Q96NT0 180 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 GPATCH1Q9BRR8 931 aaKnown RBP9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 POLDIP3Q9BY77 421 aaKnown RBP9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 ZNF350Q9GZX5 532 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 CLEC4MQ9H2X3 399 aaPredicted RBP9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 SERHL2Q9H4I8 314 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 MANSC1Q9H8J5 431 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 POLE3Q9NRF9 147 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 BTNL2Q9UIR0 455 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 EDARQ9UNE0 448 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 GPC6Q9Y625 555 aaPredicted RBP9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 KCNE3Q9Y6H6 103 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 MED13LQ71F56 2210 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 GJE1A6NN92 205 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 SHISA8B8ZZ34 492 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 ETV2O00321 342 aaPredicted RBP9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 EIF1AYO14602 144 aaKnown RBP9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 KIAA0513O60268 411 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 DNAJA2O60884 412 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 STX11O75558 287 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 ALDOCP09972 364 aaKnown RBP9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 S100A3P33764 101 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 EIF1AXP47813 144 aaKnown RBP9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 RPS26P62854 115 aaKnown RBP9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 SNTB1Q13884 538 aaKnown RBP9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 SGCBQ16585 318 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 FAM174BQ3ZCQ3 159 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 SLC25A53Q5H9E4 307 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 PDSS1Q5T2R2 415 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 ATAD3BQ5T9A4 648 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 AGBL2Q5U5Z8 902 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 CBLN3Q6UW01 205 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 FAM214BQ7L5A3 538 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 C16orf62Q7Z3J2 963 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 ANKRD46Q86W74 232 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 TRIML2Q8N7C3 387 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 CNEP1R1Q8N9A8 125 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 OR10D3Q8NH80 312 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 OR2V1Q8NHB1 315 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 POC1BQ8TC44 478 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 MGARPQ8TDB4 240 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 NEURL3Q96EH8 262 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 GMPPAQ96IJ6 420 aaPredicted RBP9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 ZNF845Q96IR2 970 aaPredicted RBP9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 MRGPRX4Q96LA9 322 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 KLHL15Q96M94 604 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 GLRX2Q9NS18 164 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 PGPEP1Q9NXJ5 209 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 ELOVL5Q9NYP7 299 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 MCTS1Q9ULC4 181 aaKnown RBP9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 GPR45Q9Y5Y3 372 aa9.34□□□□□ -0.91
PTCD2P1-201ENST00000554393 PRRC2AP48634 2157 aaKnown RBP9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 NPIPA5A0A0B4J1W7 369 aa9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 SH3D21A4FU49 640 aa9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 SERINC4A6NH21 518 aa9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 NPIPA7E9PJI5 369 aa9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 GTPBP1O00178 669 aaKnown RBP9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 ZNF264O43296 627 aa9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 DIAPH2O60879 1101 aa9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 SS18L1O75177 396 aaPredicted RBP9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 SMNDC1O75940 238 aaKnown RBP eCLIP9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 AQP8O94778 261 aa9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 NTN1O95631 604 aa9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 CPSF4O95639 269 aaKnown RBP9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 CGAP01215 116 aa9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 PGRP06401 933 aa9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 NPIPA8P0DM63 369 aa9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 UBL4AP11441 157 aa9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 IDO1P14902 403 aa9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 PRKCAP17252 672 aa9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 IL11P20809 199 aa9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 EPHA3P29320 983 aa9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 DNAJA1P31689 397 aaKnown RBP9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 CPOXP36551 454 aa9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 CD79BP40259 229 aa9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 MAGEA8P43361 318 aa9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 KHKP50053 298 aa9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 ANXA11P50995 505 aaKnown RBP9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 UFM1P61960 85 aa9.33□□□□□ -0.92
PTCD2P1-201ENST00000554393 FOXF1Q12946 379 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms