RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 CGNQ9P2M7 1197 aaKnown RBP2.59□□□□□ -1.99
SCFD1-210ENST00000553693 DPM3Q9P2X0 92 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 BCAP29Q9UHQ4 241 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 DUSP12Q9UNI6 340 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 MGAT4BQ9UQ53 548 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 ENTPD4Q9Y227 616 aa2.59□□□□□ -1.99
SCFD1-210ENST00000553693 MRPS2Q9Y399 296 aaKnown RBP2.59□□□□□ -1.99
SCFD1-210ENST00000553693 CEMIPQ8WUJ3 1361 aa2.59□□□□□ -2
SCFD1-210ENST00000553693 RBBP6Q7Z6E9 1792 aaKnown RBP2.59□□□□□ -2
SCFD1-210ENST00000553693 ZNF609O15014 1411 aa2.59□□□□□ -2
SCFD1-210ENST00000553693 COL4A1P02462 1669 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 SYNJ2BP-COX16A0A087WUM0 186 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 A0A087WZY1 265 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 TRIM49D1C9J1S8 452 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 H0YIG0 161 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 TSPAN2O60636 221 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 IGHV3-9P01782 118 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 APRTP07741 180 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 RRASP10301 218 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 ZNF17P17021 662 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 MDKP21741 143 aaPredicted RBP2.58□□□□□ -2
SCFD1-210ENST00000553693 TMOD1P28289 359 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 ADSSP30520 456 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 ACAA2P42765 397 aaKnown RBP2.58□□□□□ -2
SCFD1-210ENST00000553693 XCR1P46094 333 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 TNFSF10P50591 281 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 ARHGDIBP52566 201 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 NAPAP54920 295 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 RIPPLY3P57055 190 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 NUCB2P80303 420 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 SNX1Q13596 522 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 GK2Q14410 553 aaPredicted RBP2.58□□□□□ -2
SCFD1-210ENST00000553693 HEPACAMQ14CZ8 416 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 PAGE2BQ5JRK9 111 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 SLC22A10Q63ZE4 541 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 PP632Q6XCG6 107 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 RGS9BPQ6ZS82 235 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 PPP1R42Q7Z4L9 355 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 SYVN1Q86TM6 617 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 ENTHD1Q8IYW4 607 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 LRRC17Q8N6Y2 441 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 MLKLQ8NB16 471 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 COLGALT1Q8NBJ5 622 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 FBXO30Q8TB52 745 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 GIPC3Q8TF64 312 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 N4BP2L2Q92802 583 aaPredicted RBP2.58□□□□□ -2
SCFD1-210ENST00000553693 RAB3CQ96E17 227 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 EPSTI1Q96J88 318 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 TECTBQ96PL2 329 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 FICDQ9BVA6 458 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 ACPTQ9BZG2 426 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 NMNAT2Q9BZQ4 307 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 TRIM9Q9C026 710 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 ZDHHC6Q9H6R6 413 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 ROPN1Q9HAT0 212 aaPredicted RBP2.58□□□□□ -2
SCFD1-210ENST00000553693 APOBEC3BQ9UH17 382 aaKnown RBP2.58□□□□□ -2
SCFD1-210ENST00000553693 SIPA1L3O60292 1781 aaPredicted RBP2.58□□□□□ -2
SCFD1-210ENST00000553693 IBTKQ9P2D0 1353 aaPredicted RBP2.58□□□□□ -2
SCFD1-210ENST00000553693 CEP290O15078 2479 aa2.58□□□□□ -2
SCFD1-210ENST00000553693 KIAA0100Q14667 2235 aaKnown RBP2.57□□□□□ -2
SCFD1-210ENST00000553693 FAM230AA0A1W2PPH8 454 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 ANKRD30BLA7E2S9 258 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 RSPH10B2B2RC85 870 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 GPR89AB7ZAQ6 455 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 PDXKO00764 312 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 MAPK13O15264 365 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 TOM1L1O75674 476 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 SERF1AO75920 110 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 RHOBTB1O94844 696 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 MFN2O95140 757 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 ANP32DO95626 131 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 CXCL14O95715 111 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 EPOP01588 193 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 CXCL10P02778 98 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 PCCBP05166 539 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 TPM2P07951 284 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 RSPH10BP0C881 870 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 GPR89BP0CG08 455 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 ZNF853P0CG23 659 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 CT45A8P0DMV1 189 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 CT45A9P0DMV2 189 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 EPB41P11171 864 aaKnown RBP2.57□□□□□ -2
SCFD1-210ENST00000553693 KRT13P13646 458 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 PVRP15151 417 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 CPN1P15169 458 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 CYP3A5P20815 502 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 DNAJB1P25685 340 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 PSMA5P28066 241 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 AKT2P31751 481 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 NF2P35240 595 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 HERV-K104P63124 156 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 HSF2Q03933 536 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 GABPB1Q06547 395 aaPredicted RBP2.57□□□□□ -2
SCFD1-210ENST00000553693 ZNF658BQ4V348 819 aaPredicted RBP2.57□□□□□ -2
SCFD1-210ENST00000553693 CT45A2Q5DJT8 189 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 TMEM26Q6ZUK4 368 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 STOX1Q6ZVD7 989 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 ASRGL1Q7L266 308 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 BNIPLQ7Z465 357 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 VPS36Q86VN1 386 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms